Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272507g00001 ATGGCAGATGAGGTGGTTCTGCTTAATTTTTGGTCGAGCCCTTTTGGTTTGAGGGCAAGGATTTCACTTGCTGAAAAGGGTATTAAGTATGAGCACAAAGAAGAAGACTTATTGGGTAACAACAAGAGCACTCTTCTCCTTGAGATGAACCCGGTTCACAAGCAAATACCGGTTCTCATCCACAATGGAAAACCAGTTTGTGAGTCTCTTAATATTGTTGAATATATTGATCAAGTGTGGAGTGATACATCTCCTCTGTTGCCTTCTGATCCTTATCAAAGAGCTCAAGCCAGATTTTGGGCTGATTATGTTGACAAGAAGGTTTTTCCTGCTCAGAAGAAGTTATGTTTTGCGACGAAAGAAGAAAAAGAATCTGCCGAGAAAGAATTCTTGGATGCCTTCAAATTGTTGGAGGAGCAACTGGGTGACAAGGATTATTTTGGAGGAGATAATTTTGGATTCGTGGACATAGCATTTGTTCCATTCTGTAGCTTTTTCAAAAACTACGAGACTGTTGGAAGCTTCAAAATGGAAGAAGAGTTCCCCAAGATTTGTGCTTGGGCCAAGAGGTGCATGCAAAAGGAAAGTGTTTCCAAGTCTCTCCCTGACTCACAAAAGGTCTCTGAGTTGTTTTCGGAGATTAGGAAGAAATTTGGAGTAGAGTAG 666 0.4099 MADEVVLLNFWSSPFGLRARISLAEKGIKYEHKEEDLLGNNKSTLLLEMNPVHKQIPVLIHNGKPVCESLNIVEYIDQVWSDTSPLLPSDPYQRAQARFWADYVDKKVFPAQKKLCFATKEEKESAEKEFLDAFKLLEEQLGDKDYFGGDNFGFVDIAFVPFCSFFKNYETVGSFKMEEEFPKICAWAKRCMQKESVSKSLPDSQKVSELFSEIRKKFGVE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272507g00001 221 FunFam Tau class glutathione S-transferase 1 89 - -
Stsc272507g00001 221 Gene3D Glutaredoxin 1 89 - -
Stsc272507g00001 221 CDD GST_N_Tau 5 80 - -
Stsc272507g00001 221 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Stsc272507g00001 221 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Stsc272507g00001 221 FunFam Glutathione S-transferase U20 90 221 - -
Stsc272507g00001 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Stsc272507g00001 221 SUPERFAMILY Thioredoxin-like 5 109 IPR036249 -
Stsc272507g00001 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Stsc272507g00001 221 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Stsc272507g00001 221 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Stsc272507g00001 221 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Stsc272507g00001 221 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Stsc272507g00001 221 Gene3D - 90 221 - -
Stsc272507g00001 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272507g00001 Stsc-Chr272507 4980 6745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272507g00001 1 221 Glutathione S-transferase Gene Family AT1G17180 59.276 6.43e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272507g00001 K00799 - gmx:547520 327.02