Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272505g00004 ATGGAGGATACACACATATGCATTGGAGACTTGGCAAAAAGATTTGGATATAACAACAACCTACTCTCTCAGGAAGCTGTTTCATTCTATGGTGTATTTGATGGACATGGAGGGAAGAGCGCGGCTCAATTCGTGCGAGATCATCTGCCAAGGGTCATTGTTGAGGATGCTGACTTCCCTTTGGAACTTGAGAAGGTTGTAACAAAGTCTTTCTTGGATACTGATGCTGAGCTTAAAGCATACTCTCTTGAATCTTCCTTATCTTCTGGAACTACTGCACTCACTGCAATTATATTCGGAAGGTCATTGCTTGTAGCCAATGCAGGAGACTGCAGGGCTGTGTTGTCGCGCCACGGGGCAGCAATAGAGATGTCCAAGGATCATAGACCATACTGCATTAAAGAAAGAAAGCGCATAGAGTCCCTAGGTGGATTCATTGATGATGGCTACCTGAATGGCCAGTTAGGTGTCACTCGTGCTCTAGGCGACTGGCATCTTGAAGGAATGAAGGAAACAGGTGGTGGTGGTGGTGGCGGAGGTGGAGGTGGACCATTGAGTGCGGAGCCTGAACTCAAATTGATGACATTGAGCAAAGAAGACGAATTCTTGATCATAGCAAGTGATGGAATTTGGGATGTTTTTCGTAGCCAAAACGCAGTGGATTTTGCTAGGAGGAGGCTTCAAGAACACAATGATGTGAAGCAATGCTGCAAGCAAATAGTAGAGGAAGCAATAAAGAGAGGAGCAACAGATAACTTAACAGTTGTGATGGTATGTTTTCAGTCAGATCCACCACCACCTGTGGTTGTGGAAAGAGCAAGAGTTAGAAGAAGCATATCTGCTGAGGGACTGCAGAACCTTAAATGCCTACTCCAAGGTTAA 882 0.4524 MEDTHICIGDLAKRFGYNNNLLSQEAVSFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTKSFLDTDAELKAYSLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRHGAAIEMSKDHRPYCIKERKRIESLGGFIDDGYLNGQLGVTRALGDWHLEGMKETGGGGGGGGGGGPLSAEPELKLMTLSKEDEFLIIASDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKQIVEEAIKRGATDNLTVVMVCFQSDPPPPVVVERARVRRSISAEGLQNLKCLLQG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272505g00004 293 FunFam Probable protein phosphatase 2C 22 1 263 - -
Stsc272505g00004 293 Pfam Protein phosphatase 2C 1 252 IPR001932 -
Stsc272505g00004 293 ProSiteProfiles PPM-type phosphatase domain profile. 1 260 IPR001932 -
Stsc272505g00004 293 PANTHER PROTEIN PHOSPHATASE 2C 1 258 IPR015655 GO:0004722|GO:0006470
Stsc272505g00004 293 CDD PP2Cc 1 260 IPR001932 -
Stsc272505g00004 293 SMART PP2C_4 4 258 IPR001932 -
Stsc272505g00004 293 Gene3D - 1 263 IPR036457 -
Stsc272505g00004 293 SUPERFAMILY PP2C-like 1 261 IPR036457 -
Stsc272505g00004 293 ProSitePatterns PPM-type phosphatase domain signature. 29 37 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272505g00004 Stsc-Chr272505 10992 12617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272505g00004 1 293 PP2C-type Phosphatase Gene Family AT2G25620 61.149 1.01e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272505g00004 K14803 - gmx:100782648 465.692