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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Stsc272500g00003
ATGTCCGCCCCTAATCCCTACCTACACGTGCTCACCAATCACCATCTGTTGTTCTCTCAGTCCCGCAATATCTCAAAGCCTCATACTCCTCCTGGGGTTTCTTTTCTTTCTTCTCACTTTCTGCTGCTTCAACAACTTTCTGTGACCCCAAACCGTTGCAACATTAGACAACACCTTCGAGGGATGGAGGCTCTTGGTACCGTGGATGACCTCTTGGATTTCTCATCAGACATAGGTGAGGATGACGATGATGTTGTTGACAGAACTAGAAAAAGCATTCCTAGTAACGCAGAATGCAAGCTACCTTCATTCGACCCATTGGGCCAGGATGATCCTAACCATTCATTCTCTGAGTTTGCCGATGAAGAGCTTGAATGGTTGTCCAATAAAGACGCATTTCCTGCTGTCGAAACATTTGTTGACATATCATCTATTCAGCCTAACCTATCAAAGCAACAAGGGACAGCCAACGGCAACAGTAATAACAGCACTAACAACATTACACTCTTAAACGGCTTTGATCACCTGAAGGTCCCCGTCCGTGCACGGAGCAAGTGTCGTAGTAGGCCTCGCTCAACTACCGCCGACATCTCAAGTCGTCAGTCCTGGTGGAAACTACCTAGTAGCCAAATTTCAAGAGCAGAAGTGTTAAAAATCCCAACCATTGGGAGGAAATGTCAGCACTGTGGATCTGAAAAGACTCCACAGTGGCGAGCTGGTCCACTCGGGCCAAAAACCCTTTGTAATGCCTGTGGGGTTAGGTTTAAGTCCGGTCGGCTTGTCCCGGAGTACCGTCCGGCGAGCAGCCCAACTTTTCGTAGCGAATTGCATTCTAATTCCCATCGGAAGATAATCGAGATGAGGAAGCAGAAGCAAATGGGAAAAGTTTGA
891
0.4747
MSAPNPYLHVLTNHHLLFSQSRNISKPHTPPGVSFLSSHFLLLQQLSVTPNRCNIRQHLRGMEALGTVDDLLDFSSDIGEDDDDVVDRTRKSIPSNAECKLPSFDPLGQDDPNHSFSEFADEELEWLSNKDAFPAVETFVDISSIQPNLSKQQGTANGNSNNSTNNITLLNGFDHLKVPVRARSKCRSRPRSTTADISSRQSWWKLPSSQISRAEVLKIPTIGRKCQHCGSEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRSELHSNSHRKIIEMRKQKQMGKV
296
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Stsc272500g00003
296
ProSitePatterns
GATA-type zinc finger domain.
226
251
IPR000679
GO:0006355|GO:0043565
Stsc272500g00003
296
SMART
GATA_3
220
270
IPR000679
GO:0006355|GO:0043565
Stsc272500g00003
296
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
222
283
-
-
Stsc272500g00003
296
Pfam
GATA zinc finger
226
259
IPR000679
GO:0006355|GO:0043565
Stsc272500g00003
296
PANTHER
GATA TRANSCRIPTION FACTOR
54
292
-
-
Stsc272500g00003
296
CDD
ZnF_GATA
225
273
IPR000679
GO:0006355|GO:0043565
Stsc272500g00003
296
Gene3D
-
221
295
IPR013088
GO:0006355|GO:0008270
Stsc272500g00003
296
FunFam
GATA transcription factor
217
296
-
-
Stsc272500g00003
296
ProSiteProfiles
GATA-type zinc finger domain profile.
220
256
IPR000679
GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Stsc272500g00003
Stsc-Chr272500
13812
18046
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Stsc272500g00003
67
293
C2C2-Gata Transcription Factor Family
AT4G32890
38.951
5.87e-41
142
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Stsc272500g00003
GATA
1.7e-16
CL0167
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Stsc272500g00003
-
-
ahf:112727508
410.223
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