Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272465g00004 ATGAGCTCCGAAATAGTTCTCCATCAGCAATTTTCGCAACCAGATGCTATTCCCATTTCCTCCACTGCCGCCACCACAACCACCAAACCTTCCACCAACACCGCTGTCGCCCTCAGAAAATCATCCGCCGCCGGCGCATTATCCACCACCTCGTCGCGCTCCAACAAAGATCGCCACACCAAGGTCAATGGCCGCGGCCGCCGCGTTCGCATGCCACCGCTTTGCGCCGCTCGGATCTTCCAGCTCACACGCGAGCTCGGCCACCGCTCCGACGGCGAAACCATCGAGTGGCTCCTCCGCAACGCTGAGGCATCCATAATCGCCGCAACCGGAACCGGCACCGTCCCTGCCGCGCCGGTTTCTTCCTCTGCCGGCGCGGTCACATCCTCAGCTCCGTCTGTGTCGTGCCGTGTTCAGCCGTCTGCATCGTCCACCCCGACGACGGTGTGCGGTGGTGGGAGTCAGTGGCCGAGCTGCCGACTGGACCTGTGCCAGGCTCCGGCTGGAATGGAATACGCGGCGGCAGTGAATGGTCAGCGGTACATGCCGTTCACGTCATTGCTGTTGCAGCCTGCGACGGCGGATGAATCGCAGCACGAGGAGGCTCTCAGCGATCAATGA 621 0.6232 MSSEIVLHQQFSQPDAIPISSTAATTTTKPSTNTAVALRKSSAAGALSTTSSRSNKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRNAEASIIAATGTGTVPAAPVSSSAGAVTSSAPSVSCRVQPSASSTPTTVCGGGSQWPSCRLDLCQAPAGMEYAAAVNGQRYMPFTSLLLQPATADESQHEEALSDQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272465g00004 206 ProSiteProfiles TCP domain profile. 55 109 IPR017887 -
Stsc272465g00004 206 Pfam TCP family transcription factor 54 142 IPR017887 -
Stsc272465g00004 206 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 147 IPR005333 GO:0003700
Stsc272465g00004 206 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272465g00004 Stsc-Chr272465 20220 20840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272465g00004 56 193 TCP Transcription Factor Family AT2G37000 56.115 6.54e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc272465g00004 TCP 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272465g00004 - - cam:101510590 213.386