Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272460g00004 ATGGGGATTGTCTCTGAGTTTCATCAGCATAATCTTGCTTGCGACAAAGCTATCATATTTGTTTTCAAGAACAAGCTGGATATCACATTATGTGTTGCTTTGGGGTCTGCAACTCAGATTAGCATGTTTGTGGTTCCAGTGTGTGTGATTGTTAGTTGGATCCTTGGCATAAAAATGGACCTCAACTTCAACCTCATCGAGACAGGTTCTCTTGCTTACAATAATTGTCACAGCTTTCACATTACAGATGTAACTTCTACCTACTTGAAAGGCGTTGTTCTCCTCCTTTGGTACATTGTTACTGAGGCCTGCTTCTTCGTTCAGATAACACCCTTTGATCAACCTAATGATGAAGTTAATAATGTGATGCTTAAACCCGCAACCGATGCAGTTTTTAGAGCTTAA 405 0.4 MGIVSEFHQHNLACDKAIIFVFKNKLDITLCVALGSATQISMFVVPVCVIVSWILGIKMDLNFNLIETGSLAYNNCHSFHITDVTSTYLKGVVLLLWYIVTEACFFVQITPFDQPNDEVNNVMLKPATDAVFRA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272460g00004 134 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 110 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272460g00004 Stsc-Chr272460 20684 21490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272460g00004 17 116 Antiporters AT5G01490 58.416 4.68e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272460g00004 K07300 - gmx:100779440 146.747