Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272456g00008 | ATGAACTTGGCCAGCAGCAGAAGTCACTGTGTTTATATATTCACAATCCAGCAAGAATCTTCGAGAGATAAAAGGATGAGGTCCGGAAAATTAATTCTTGTGGACTTGGCGGGGTCTGAGAAAGTGGAGAAAACAGGTGCCGAAGGAAGAGTTCTAGAAGAAGCTAAAACCATAAACAAATCATTGTCTGCTCTTGGGAATGTAATAAGTTCTCTTACAAGTGGTTTGCAAGGAAAATCAAGCCATATCCCGTATCGTGATTCCAAGCTCACCCGAATGCTTCAGGATTCACTTGTTAGTTTCTTCACCACTCTAATCTATCAAATCATACCCATTATTCACCAAATCAGTGTCCCTCATAAAGTATTTCTTATTCAAAGGGAGGAAACACTAGGACTGCATTACTATGTTGTTGCTCACCCAGTGCTTCTAATGTATCAGAGTCTCTGTCCACACTCCGTTTCGGTGCAAGGTATGTAA | 480 | 0.4104 | MNLASSRSHCVYIFTIQQESSRDKRMRSGKLILVDLAGSEKVEKTGAEGRVLEEAKTINKSLSALGNVISSLTSGLQGKSSHIPYRDSKLTRMLQDSLVSFFTTLIYQIIPIIHQISVPHKVFLIQREETLGLHYYVVAHPVLLMYQSLCPHSVSVQGM | 159 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272456g00008 | 159 | Pfam | Kinesin motor domain | 1 | 111 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc272456g00008 | 159 | ProSiteProfiles | Kinesin motor domain profile. | 1 | 143 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc272456g00008 | 159 | SMART | kinesin_4 | 1 | 115 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc272456g00008 | 159 | Gene3D | Kinesin motor domain | 1 | 118 | IPR036961 | - | |
Stsc272456g00008 | 159 | PRINTS | Kinesin heavy chain signature | 30 | 48 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc272456g00008 | 159 | PRINTS | Kinesin heavy chain signature | 83 | 104 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc272456g00008 | 159 | PANTHER | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED | 1 | 98 | IPR027640 | GO:0003777|GO:0007018 | |
Stsc272456g00008 | 159 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 111 | IPR027417 | - | |
Stsc272456g00008 | 159 | ProSitePatterns | Kinesin motor domain signature. | 29 | 40 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272456g00008 | Stsc-Chr272456 | 21971 | 22523 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272456g00008 | 1 | 107 | Calmodulin-binding Proteins | AT5G65930 | 49.533 | 6.14e-23 | 92.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272456g00008 | - | K10396 | gmx:100812891 | 173.711 |