Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272456g00008 ATGAACTTGGCCAGCAGCAGAAGTCACTGTGTTTATATATTCACAATCCAGCAAGAATCTTCGAGAGATAAAAGGATGAGGTCCGGAAAATTAATTCTTGTGGACTTGGCGGGGTCTGAGAAAGTGGAGAAAACAGGTGCCGAAGGAAGAGTTCTAGAAGAAGCTAAAACCATAAACAAATCATTGTCTGCTCTTGGGAATGTAATAAGTTCTCTTACAAGTGGTTTGCAAGGAAAATCAAGCCATATCCCGTATCGTGATTCCAAGCTCACCCGAATGCTTCAGGATTCACTTGTTAGTTTCTTCACCACTCTAATCTATCAAATCATACCCATTATTCACCAAATCAGTGTCCCTCATAAAGTATTTCTTATTCAAAGGGAGGAAACACTAGGACTGCATTACTATGTTGTTGCTCACCCAGTGCTTCTAATGTATCAGAGTCTCTGTCCACACTCCGTTTCGGTGCAAGGTATGTAA 480 0.4104 MNLASSRSHCVYIFTIQQESSRDKRMRSGKLILVDLAGSEKVEKTGAEGRVLEEAKTINKSLSALGNVISSLTSGLQGKSSHIPYRDSKLTRMLQDSLVSFFTTLIYQIIPIIHQISVPHKVFLIQREETLGLHYYVVAHPVLLMYQSLCPHSVSVQGM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272456g00008 159 Pfam Kinesin motor domain 1 111 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc272456g00008 159 ProSiteProfiles Kinesin motor domain profile. 1 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc272456g00008 159 SMART kinesin_4 1 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc272456g00008 159 Gene3D Kinesin motor domain 1 118 IPR036961 -
Stsc272456g00008 159 PRINTS Kinesin heavy chain signature 30 48 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc272456g00008 159 PRINTS Kinesin heavy chain signature 83 104 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc272456g00008 159 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 98 IPR027640 GO:0003777|GO:0007018
Stsc272456g00008 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 111 IPR027417 -
Stsc272456g00008 159 ProSitePatterns Kinesin motor domain signature. 29 40 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272456g00008 Stsc-Chr272456 21971 22523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272456g00008 1 107 Calmodulin-binding Proteins AT5G65930 49.533 6.14e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272456g00008 - K10396 gmx:100812891 173.711