Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272455g00006 ATGCCCACTCCCCACGAACTTAAACTGCTATCAGACATTGATGATCAAGAAGGATTTCGTTTCCAACTTCCAAGCATATTTGTAAACCGTCACAATCCATCAATGGAAGGAAAAGATCCAGTTAAGGTGATCAGAGATGCACTCTCAAGAACACTTGTGTTCTACTACCCATTTGCCGGTAGACTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACCGCAGAGGGTGTCTTGTTCATCGAGGCCGATGCTGACGTGGCAATTGATCAACTTGGTGACTCCCTTCAACCTCCATTCCCTTGTTTTGAAGAGCTTCTTTACAATGTTCAAGGATCCGATGGAATCCTTAACTGTCCACTTCTACTCATTCAGGTCACACGCTTTAAATGCGGTGGTTTCACTCTTGCCTCACGCCTAAACCACACCATGACTGATGGCTATGGTTTTGTACAATTTATCACTGCCGTGGCTGAAATAGCTCGTGGCGCACATCAACCTTCCATTCTACCTGTCTGGGCCAGGGACCTGTTATCCGCAAGGGACCCACCGCGCATTACATGCAACCATCGTGAATACGAAGAAGCCATAGACACTAGTCACACCACCACCTACATGAACAAGAAAGACATGGTTCAACGCTCCTTCTTCTTTGGACCAACCGAAATAGCTTCCCTTCGTCGTCTGGTTCCACCTCACCTTGGCCACTGCACTCGATTTGAACTTATAACTGCATGTCTATGGTGTTGCCGTACAAAAGCATTGCAACTTGCACCAGAGCATGAAGTTCGCATGATGTGCATCGTGAATGCACGTGATAGGCTTAACAACCCTAAGATTCCAATTGGTTATTACGGAAACGTTTTTGTTTATCCGGCAGCAGTTACAACCGTAAAGAAGCTTTGTGAAAATCCGCTTGGATATTCTGTTGAGTTGATCAAGAAAGCAAAAGCTGAGGTGACTGAAGAGTACGTGCGTTCTGTGGCAGATCTAATGGTCACGAAAGGACGACCGTTATTTACAACCGTTGGATCTTGCATTGTGTCAAACTTGACACGTGCTGGGTTAAGAGAAGTGGATTATGGATGGGGTAATGCATTGTACGGAGGTGTATCTGAAAGTGGGGTTGCGGATTTTTTTGGAGTAACGTTTATCATGGATTGTGAGAATGCTAAAGGAGAAGAAGGTGTAATGTTTCCAATTTTCCTGCCGGATAATGCTATGAAGAGGTTTGAGAAAGAGTTGGGTGATGTGCTTTGCAAGAGTGATGATGCATATCGCACATCTATAAGATCTTCCTTGTAG 1308 0.4526 MPTPHELKLLSDIDDQEGFRFQLPSIFVNRHNPSMEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGRKLMVDCTAEGVLFIEADADVAIDQLGDSLQPPFPCFEELLYNVQGSDGILNCPLLLIQVTRFKCGGFTLASRLNHTMTDGYGFVQFITAVAEIARGAHQPSILPVWARDLLSARDPPRITCNHREYEEAIDTSHTTTYMNKKDMVQRSFFFGPTEIASLRRLVPPHLGHCTRFELITACLWCCRTKALQLAPEHEVRMMCIVNARDRLNNPKIPIGYYGNVFVYPAAVTTVKKLCENPLGYSVELIKKAKAEVTEEYVRSVADLMVTKGRPLFTTVGSCIVSNLTRAGLREVDYGWGNALYGGVSESGVADFFGVTFIMDCENAKGEEGVMFPIFLPDNAMKRFEKELGDVLCKSDDAYRTSIRSSL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272455g00006 435 Gene3D - 194 416 IPR023213 -
Stsc272455g00006 435 Pfam Transferase family 10 415 - -
Stsc272455g00006 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 414 - -
Stsc272455g00006 435 Gene3D - 1 193 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272455g00006 Stsc-Chr272455 30430 31906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272455g00006 20 419 Monolignol Biosynthesis Gene Families AT5G48930 29.087 2.08e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272455g00006 K19861 - gmx:100792864 563.148