Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272450g00005 ATGGGCGGTATAGGTAAAACAACTATTGCCGCTGCAATTTTCAAGGAGTTCTCTCCAAAATTTTCAATGTTAAGGCGCAAGAAAGTTTTCATTGTATTAGATGATGTGCATACTTCTGAACTCTTAGAAACTTTGCTTGGAGTTGGACTTGATTATTTAGGATTTGGCAGCAAAGTCATTGTGACAACCAGAAATAAGCATGTGCTTCATGGTAGAGTCATTGAAGATCACATTCATGAAGTCAAAGAAATGAATTTTGAGAACTCCCTCAAACTTTTCAACCTAAATGCCTTCAACGAGCTTCATCCTCCAAAAGATCAATTTTGGGATCTATCAATGATAGCAGTTCAATATGCAAGTGGCATCCCTTTAGCTTTGAAAGTTTTGGGATCTTTTCTGAGATCCAAAACTTACAATGAATGGGAGAGTGCATTGGCAAAACTGAAAGCAATTCCCAATGGAGATATTCAGCAGGAAATGGGCCACAAAATTGTTAATGAAGAATCCATTAAGAACCCTGGAGGGCGTAGCAGGTTGTGGAAATCTGAAGAAGTTCGAGACATTTTGAAAAATGACAAAGGGACTGATGCAATTGAGACAATATTCTTGGATATGACTCAAGACACGGACCTATGTATAAGTTCCCAGGCATTTAGGAAGATGCCAAACCTAAGGTGA 678 0.385 MGGIGKTTIAAAIFKEFSPKFSMLRRKKVFIVLDDVHTSELLETLLGVGLDYLGFGSKVIVTTRNKHVLHGRVIEDHIHEVKEMNFENSLKLFNLNAFNELHPPKDQFWDLSMIAVQYASGIPLALKVLGSFLRSKTYNEWESALAKLKAIPNGDIQQEMGHKIVNEESIKNPGGRSRLWKSEEVRDILKNDKGTDAIETIFLDMTQDTDLCISSQAFRKMPNLR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272450g00005 225 PRINTS Disease resistance protein signature 119 133 - -
Stsc272450g00005 225 PRINTS Disease resistance protein signature 219 225 - -
Stsc272450g00005 225 PRINTS Disease resistance protein signature 23 37 - -
Stsc272450g00005 225 Gene3D - 84 165 IPR042197 -
Stsc272450g00005 225 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 150 IPR044974 GO:0006952
Stsc272450g00005 225 Gene3D - 18 75 IPR027417 -
Stsc272450g00005 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 158 IPR027417 -
Stsc272450g00005 225 Pfam NB-ARC domain 22 154 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272450g00005 Stsc-Chr272450 30549 31849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272450g00005 1 152 WRKY Transcription Factor Family AT5G45050 31.156 1.08e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272450g00005 - - ahf:112777818 367.466