LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc272435g00002	ATGGAAGAAAGCAAAGGAAGAGTGTGTGTCACTGGAGGAACAGGGTTTATAGGTTCATGGATCATCAAAAACCTCCTTCAAGATGGTTACTCTGTTAATACAACTGTGAGATCCAACCCAGAACACAAGAGAGATATTAGCTTTCTCACTAATTTGCCTGGAGCATCACAAAATCTTCAAATTCTGAGTGCTGATCTCAGCAATCCAGAAAGTTTCAGTGCAGCCATTGAAGGATGCATTGGAGTTTTCCATGTTGCAACTCCAATGGACTTTGAATTACAAGAAGCTGAAGAAGTGGTGACAAAAAGAACCATTGATGGAGCACTAGGAATTCTCAAGGCATGTCTGAATTCCAACACTGTGAAGAGAGTAATCTACACTTCAAGTTCCTCTGCTGTTTTGTACCATAATAGTAGTGGCAAAGATGATAGTGAAGAAGTTGTGTTTAATGAGGATTTTTGGAGTGATGTGGATTACCTTAGAGCTTCAAAGGTTGATGGTTGGTCCTATTCTGTTTCTAAGACACTCACAGAAAAAGCAGTGCTTGAATTTGGGGAACAGAATGGATTGGATGTTGTGACTTTGGTTCCAACTTTTGTTCTTGGACCTTTTATTTGTCCTAAGCTACCTAGTTCAGTTCATGCTTCATTGTCCTTGGCGTTTGGGGACAAAGGTCCTTTTGGGTGGCTCCTTCAGGCACCTATGGTGCATGTGGATGACGTGGCAAGAGCCCATATATTTCTACTTGAACATCCTAACCCTAAAGGGAGGTATAATTGTTCATCATCTTTGGTTACTGTTGAAACAATATCTCAAATTGTTTCGTCTAAATACCCAGAATTTCAGCTGTCAATGCTAGACAAGTTGAAGCAAATTGAAGGTACCAAGGTACAAGATTTATCATCAAAGAAGCTCATAGATGCTGGATTTGTGTTCAAGTATGGACTTGAGGAAATGGTTGATGGTGCAATTCGATGTTGCCAAGAAAAGGGTTACATGTGA	1002	0.4022	MEESKGRVCVTGGTGFIGSWIIKNLLQDGYSVNTTVRSNPEHKRDISFLTNLPGASQNLQILSADLSNPESFSAAIEGCIGVFHVATPMDFELQEAEEVVTKRTIDGALGILKACLNSNTVKRVIYTSSSSAVLYHNSSGKDDSEEVVFNEDFWSDVDYLRASKVDGWSYSVSKTLTEKAVLEFGEQNGLDVVTLVPTFVLGPFICPKLPSSVHASLSLAFGDKGPFGWLLQAPMVHVDDVARAHIFLLEHPNPKGRYNCSSSLVTVETISQIVSSKYPEFQLSMLDKLKQIEGTKVQDLSSKKLIDAGFVFKYGLEEMVDGAIRCCQEKGYM	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc272435g00002	333	CDD	FR_SDR_e	8	310	-	-
	Stsc272435g00002	333	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	4	327	IPR036291	-
	Stsc272435g00002	333	FunFam	Dihydroflavonol 4-reductase family	6	333	-	-
	Stsc272435g00002	333	Gene3D	-	5	333	-	-
	Stsc272435g00002	333	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	5	321	-	-
	Stsc272435g00002	333	Pfam	NAD dependent epimerase/dehydratase family	8	259	IPR001509	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc272435g00002	Stsc-Chr272435	10957	15575	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc272435g00002	4	333	Monolignol Biosynthesis Gene Families	AT2G02400	35.736	2.54e-61	197

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc272435g00002	-		K13265	ahf:112728260	582.408