Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272410g00001 ATGTCGAATCTGGATCTCTCAAAAGTTTCTCTACGGCCATTCAAGCTAACTGATGCTGACGACTTTTTGCTATGGGCTGGGGATGATCGAGTCACACAAAATTTAAGATGGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCCTTCATAAGAGAGGTGTGCATACCTCATCCATGGCGACGCTCAATCTGCCTCCACGACCGTTCCATAGGCTTTGTTTCGGTGTATCCTTGGTCAGGTGATGATAGATGCAAGGCTGACATAGGCTATGCTCTGGCTGCAGATTACTGGGGCCACAGCATAGCCACCAAAGCAGTGAAGATGGCTGTGCCTCAAGTGTTTAAGGACTTGCCTCATCTGCTGAGGTTGCAGGCTTTCACTTCCCCGGAGAACAAGGCTTCTCAGAGAGTACTGGAAAAGGCTGGGTTCCTTAAGGAGGGTGTGCTCAGAAAGTATACTTACATTAAAGGGAACATTAAGGATTCGGTAGTGTTTAGTTTCTTGTCAACTGATGAATTTCCTCATGATGACTGCTAG 537 0.4711 MSNLDLSKVSLRPFKLTDADDFLLWAGDDRVTQNLRWKTCGSREEALAFIREVCIPHPWRRSICLHDRSIGFVSVYPWSGDDRCKADIGYALAADYWGHSIATKAVKMAVPQVFKDLPHLLRLQAFTSPENKASQRVLEKAGFLKEGVLRKYTYIKGNIKDSVVFSFLSTDEFPHDDC 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272410g00001 178 Gene3D - 2 175 - -
Stsc272410g00001 178 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 171 - -
Stsc272410g00001 178 Pfam Acetyltransferase (GNAT) domain 10 143 IPR000182 GO:0016747
Stsc272410g00001 178 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Stsc272410g00001 178 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 160 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272410g00001 Stsc-Chr272410 808 1344 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc272410g00001 Acetyltransf_3 7.2e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272410g00001 - - gmx:100527210 294.664