Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272406g00005 ATGGTCTTCAAGGGGAGATTCTTCTCCTCCAAGAAATCCGATTCCGATGGCTCCTCTAACAGTCCCCGATCCCTCCCATCCAACTCCCCATCCAGATCCGACAAGAAGAAGTCCAAATCCCTAACCCCTCCCGCCGCCGCCGCACCCGTCGCCTGCCGCCAGACGCAGGTCAAGGACGCCACCACCAAGAATAAAGACGCAGTTAAGCCCAAGGAAGCTCAGGTTCCACCTGCCGCCAAGGATTCCGCGTCTCCATTGAAGTCTAAGAAGTCTTTGTCGGCGGCGGTGGCGGCGGCGGCGGTCACGGAGCCACCAGCCAAGGATTCTACGTCGCCGTCGTCGTCCTCCGTGTCGGTGTCGCCGATCCTGGCTTCGTCGCTAGGGTTGAACAGAATCAAGACGCGATCGGGGCCTTTGCCGCAGGAGAGCTTCTTTGGGTTCAGGGGAGATAAAGGACCGGCTGCGGCGCTCGGCGCCAGCAACCTTTCGAGGCCTGGCGGTGGTGGTGGTGACGGGAGTTCTGGTTCCGGCAGCGGCGGTAAGAAGAAAGAGAGCCGAGTAGGGTTTCAAGAGGGTTTCGCAGCTGGTTCTGGCACCGGTTGGATTGATAATGGCAGCAATTCAGATAGCATGTCCACTGGGAGTGGACCTTCTAGGGAACAGAGCCCAATCGTGTTGCCAAGGTCGCGTTTGCAGAACGGAGAATCATCTTCCGAAGCTGGGAGACAGACATCGTCATGGGCTCATACTGGAGGGGTAAGAGGTGCAGATTGCACTCCTGAGGCAGCATATGATTATGAAAACCCCAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATCTTGCGGGTCACAAGTGCACCTCGAAAGAGGTTTCCTGCAGACATCAAGAGTTTTTCTCATGAGTTGAATTCCAAAGGTGTCCGACCTTTTCCGTTTTGGAAGCCTCGGGGGTTAAATAATGTGGAGGAAGTATTGGTTGTTATAAAGGCAAAATTTGATAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTATTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAGTGGCAGGAGACAATTGAGGACTTGCTGATTTTGGCTAGGAGCTGTGCTATGTCTTCAGCTGGGGAGTTTTGGCTTAGGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCTTCCTCCTGGGATGCTAAAGCAGCTTCATACTCGAATGCTTTTTATTCTCACCAGGTGTACTAGATTATTGCAGTTCCACAAGGAAAGTGGTCTGGCCGAGGATGAACATGTTTTCAATCTCCGTCAATCCAGAGTCTTGCATTCTGCTGAAAAGCCTGTTCCTCCTGGTTTGGCAAAGGATGTTAAAAGCTCTAGTGCTGCAAAATCCTCAAAGAACTCAACCAAAAAGGCATATAGTCAGGAACAAAGAATGTTGAATTGGAAGAAAGGAGTCTCACAACCAGAAAACTTATCACTTCCTACTGATGATGAGCCATCAAAACATCTTGAGTCTCCTTCAGGAAGGGACCGGATGGCTTCTTGGAAGAAATTCCCTTCACCATCAGGAAAAAGCCCAAAAGAAGCTGATCAGTTGAAGGACCACAGTTATGGAAAGGTTGAACCTTCAAAGACATCAAGTAGTAAGAGATTCACTTCCGATGGTGATCTCTCTTCTGCTAAGCCACCTGAGCTTCTTCCTGCCAAAGATTCTCAGGATCATGCTTCCAAGCACCATCATAAAGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAGCTCAATAATTTGTCGTATATGCGAGGAAGAAGTAGCTACTTCACATGTTGAAGATCACTCAAGGATTTGTGCAGTTGCTGATCGATGTGATCAGAAGGGTCTGAGTGTTAATGAACGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAGTCATGTACACAGAAGGATACCCAACAAATAGTGGGAAGTCCAGATGTTGCAAAAGTGTCAAATTCAAGCATGACTGAAGAATCTGATGTAGTTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGATCAGAGGATATGCTAGACTGTTTCCCTGAAAATGATAATACTATGAATGAACTTGCTGATATAGCACGCTGTGTAGCAAACACACCTCTGGATGATGATCGCTCAACCTCATATTTATTATCTTGTCTTGATGACTTACGAGTTGTTGTAGACCGGAGGAAATTCGATGCACTTACTGTGGAGACCTTTGGAACACGTATCGAGAAGCTGATACGTGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTCGAAAAGGTAGATATGGAGAGCACTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTCCGTAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGACCGTACCTCTATTGATGACTTTGAGATTATAAAGCCTATAAGTCGTGGGGCATTTGGACGGGTTTTCCTGGCCAAAAAGAGAACAACTGGTGATCTTTTTGCAATTAAGGTTCTGAAGAAGGCTGACATGATTCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTTCGGAATCCTTTTGTGTATCTTAATGGAGGTGACCTATATTCGTTATTAAGGAATTTAGGTTGCTTAGATGAGGAAGTTGCTCGTGTGTATATTGCCGAAGTGGTGCTTGCATTAGAGTATTTGCATTCACTACGGGTGGTTCATCGAGACTTGAAGCCTGACAATTTATTGATTGCTCATGATGGTCACATTAAGTTAACAGACTTTGGACTTTCAAAAGTCGGTCTCATCAACAGCACGGATGACTTGTCTGGTCCAGCAGTGAGTGGGACATCCTTGCTTGGGGAGGATGAGCCTGACATGTCTACATCTGAGCATCAAAGGGAACTGAGGAAGAAACGATCTGCTGTGGGTACACCTGATTATTTGGCACCGGAGATTCTTTTGGGAACTGGACATGGGTATACAGCTGATTGGTGGTCTGTTGGGATCATTTTATTCGAGTTACTTGTTGGTCTGCCACCTTTTAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAAATGAGTCCTGAAGCTCAAGATCTTATTGATAGATTATTGACTGAAGATCCTAACCAAAGACTTGGAGCGAGAGGGGCATCAGAGGTGAAGGAACATGTTTTCTTTAAGGATATAAACTGGGACACACTTGCTAGACAGAAGGCTGCGTTTGTTCCTGCTTCCGAGAGTGCTCTAGACACAAGTTACTTCACTAGTCGCTACTCATGGAACACTTCAGAAGGTCTCGTTTATCCAGCAAGTGATGCTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCCGAGTTTGATTCTAGCTCATCGGTCAACTACTCTTTTAGTAATTTCTCCTTCAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTCTCTAAGGGATGGAAAGATGATCCACCAGCATAG 3651 0.4621 MVFKGRFFSSKKSDSDGSSNSPRSLPSNSPSRSDKKKSKSLTPPAAAAPVACRQTQVKDATTKNKDAVKPKEAQVPPAAKDSASPLKSKKSLSAAVAAAAVTEPPAKDSTSPSSSSVSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGPAAALGASNLSRPGGGGGDGSSGSGSGGKKKESRVGFQEGFAAGSGTGWIDNGSNSDSMSTGSGPSREQSPIVLPRSRLQNGESSSEAGRQTSSWAHTGGVRGADCTPEAAYDYENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSKGVRPFPFWKPRGLNNVEEVLVVIKAKFDKAKEEVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLILARSCAMSSAGEFWLRCESIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKPVPPGLAKDVKSSSAAKSSKNSTKKAYSQEQRMLNWKKGVSQPENLSLPTDDEPSKHLESPSGRDRMASWKKFPSPSGKSPKEADQLKDHSYGKVEPSKTSSSKRFTSDGDLSSAKPPELLPAKDSQDHASKHHHKVSWGYWGDQQNNSEESSIICRICEEEVATSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCTQKDTQQIVGSPDVAKVSNSSMTEESDVVSPKLSDWSRRGSEDMLDCFPENDNTMNELADIARCVANTPLDDDRSTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKVDMESTVMDDDVILEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPDMSTSEHQRELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGIILFELLVGLPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKEHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSEGLVYPASDAEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLLSKGWKDDPPA 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 980 995 - -
Stsc272406g00005 1216 Gene3D Phosphorylase Kinase; domain 1 888 1129 - -
Stsc272406g00005 1216 ProSiteProfiles AGC-kinase C-terminal domain profile. 1098 1202 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc272406g00005 1216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 1 254 - -
Stsc272406g00005 1216 SUPERFAMILY Protein kinase-like (PK-like) 823 1135 IPR011009 -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 453 587 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 1147 1164 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 1142 1165 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 505 521 - -
Stsc272406g00005 1216 ProSiteProfiles Protein kinase domain profile. 826 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272406g00005 1216 Pfam Protein kinase domain 826 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 106 132 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 200 250 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 12 29 - -
Stsc272406g00005 1216 Coils Coil 318 338 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 551 565 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 467 504 - -
Stsc272406g00005 1216 MobiDBLite consensus disorder prediction 964 995 - -
Stsc272406g00005 1216 SMART serkin_6 826 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272406g00005 1216 Gene3D Phosphorylase Kinase; domain 1 769 887 - -
Stsc272406g00005 1216 Gene3D Transferase(Phosphotransferase) domain 1 892 1115 - -
Stsc272406g00005 1216 CDD STKc_MAST_like 832 1102 - -
Stsc272406g00005 1216 PANTHER SERINE/THREONINE-PROTEIN KINASE 580 1192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272406g00005 Stsc-Chr272406 14744 25376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272406g00005 1 1214 AGC Kinase Gene Family AT3G17850 59.670 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Stsc272406g00005 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272406g00005 - - qsa:O6P43_008469 1585.47