Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272377g00006 ATGGCTAACAAGGTGAATCAACATGATCATAAAGCAGTGAAGTTGATAGAGAAGTGCCAAGTTGGTCCTCCACCAGGTTCGGTTCCTTCTCCAACCTCAATTCCTCTTTCTTTCTTTGACCTTCCATGGCTATCTTGTCCAGCAAAATGTAAACGCATTTTCTTCTATCACTTTCCTTACTCCAAAACACACTTCTTACAACAAGTGCTTCCAAATCTCAAACAATCACTTTCACTCTCTCTCAAACACTTTCTTCCACTCTCTTCCACCATAGTTTTCCCTCCAAAGCCACAAACCCCTCACTTCCTCTACTCTCAAGGTGACACTTTAACTTTTACAGTTGTTGAGTCCACAACAACAAATCTCAACAACCTCATATCTCACACACCAAGAGATGTCACATGCTTGGATCCTTTTGTTCCCATTTTGCCCTCACCACGTGCCTTAGAAGATGGCACCTTGTTGATCCCTCCTATGGCTATTCAAGTAACTGTTTTTCCAAATTCTGGTTTCACCATATGCATCACTTTTAGCCATGTGGTTGCTGATGGAAGAGCTTTTCATAATTTCATCAAGTTTTGGGCCTCACTTTGTATGTCAAAAAGGGACTTGTCATTACTTTCTTGTCCATTCCTTGATAGGGACAAAATTGGAGATCCAAATGAAAAGTCTTTTTTCTTAGAAAAATTGTGGAACATGCCCTTAAGTAGGGTAGGTCACATGGATTTTGTTCCTAATAATAATGTTGCTAATAATGATATGGTTCGACATACCATTGTGTTGAAGCCTGACCAAATTGAAAATTTGAAGAAATTAGTGTCCATGAAGTGCAAAAGCCTTGGTCTAGGGACATTATTCCACGTGTCAACATTTGTGGTGACATGCTCTTTGATCTGGATATCTTATGTTAAATTAGAATTTATTACCCAAGTTGGTGATGAATTTCCTAATGAAGATGAAGAAATATACATGATGATCTTGGCAGATTGTCGTTACCTTAGTGAAATGAAAATTCCCTTAACATACTTTGGGAACTGTTTGATCAGTGCCTTAGCAACAACCAAGAGGAGCAAGCTAGCGGGGCAAAATGGTATTTTCGAGGCAGCTATTGCTATTGGAAGTAAAGTTAGAGAATTGCAATGTGAACCTGACAAAGGTGTTGAAAGATTGATGTCCATATTTAGGAATATTGCAGCAATGAGGCATCGTGTGTTGGGTATTGCAGGTTCACCAAAGCTTGGTGTGTATGAGAGTGATTTTGGATGGGGAAAACCCAAATTGAGTGTAGTAGTTCATGTGAATTCTGGAGGAGTATTCTCCCTCTCTGATTGTAGAGACATAGAAGGTGGTGTTGGAGTTGGGATAGCACTTGAGAAGAGTCACATGCACAAATTCAACATCATTTTGAATGAGCTTCTTACAAATCTTGCAGCAGTTCATCAAGATTGA 1449 0.3941 MANKVNQHDHKAVKLIEKCQVGPPPGSVPSPTSIPLSFFDLPWLSCPAKCKRIFFYHFPYSKTHFLQQVLPNLKQSLSLSLKHFLPLSSTIVFPPKPQTPHFLYSQGDTLTFTVVESTTTNLNNLISHTPRDVTCLDPFVPILPSPRALEDGTLLIPPMAIQVTVFPNSGFTICITFSHVVADGRAFHNFIKFWASLCMSKRDLSLLSCPFLDRDKIGDPNEKSFFLEKLWNMPLSRVGHMDFVPNNNVANNDMVRHTIVLKPDQIENLKKLVSMKCKSLGLGTLFHVSTFVVTCSLIWISYVKLEFITQVGDEFPNEDEEIYMMILADCRYLSEMKIPLTYFGNCLISALATTKRSKLAGQNGIFEAAIAIGSKVRELQCEPDKGVERLMSIFRNIAAMRHRVLGIAGSPKLGVYESDFGWGKPKLSVVVHVNSGGVFSLSDCRDIEGGVGVGIALEKSHMHKFNIILNELLTNLAAVHQD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272377g00006 482 Gene3D - 250 475 IPR023213 -
Stsc272377g00006 482 Pfam Transferase family 32 466 - -
Stsc272377g00006 482 Gene3D - 12 238 IPR023213 -
Stsc272377g00006 482 PANTHER - 13 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272377g00006 Stsc-Chr272377 33615 35478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272377g00006 53 472 Monolignol Biosynthesis Gene Families AT5G48930 24.099 5.10e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272377g00006 - - ahf:112729058 663.299