Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272377g00005 ATGGCTCAATCCTTTGGTCAAACTGAGATCAACTGGGACAAGCTAGATAAAACTAAGTTCTATGTCATAGGAGCTGGCCTCTTTACCGGTGTTGCGGTGGCACTCTTCCCGGTTTCTGTTGTCAAAACAAGGCTGCAGGTTGCTACAAGGGATTCCATAGAGAAGAGTGCCTTCTCTGTTGCAAAAGGGTTGCTTAAAACCGATGGTGTCCCTGGTTTGTATCGAGGGTTTGGCACGGTTATCTCTTGTGCAATACCGGCCAGGATCATATTCCTGACAGCTCTGGAAACCACAAAGTCGGCTTCCTTCAGAATGCTTGAACCATTGAAGCTATCTGAAACATCCCAGGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCGTCGCTTGTAGCTCAATCTGTATTTGTTCCCATGGATGTGGTTTGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAGTATAGCGGGGGTTTGGATGTTGTTCGTAAGGTTTTAAAGACTGAAGGCGTCCGAGGACTATATCGAGGATTTGGTCTATCTGCTATTACTTATTCTCCTTCAAGTGCTGTATGGTGGGCAAGTTATGGTACAAGCCAACGCCTAATGTGGAAATTCTTGGGCCATGATAACCCTTCCGATGGAAACACTCCTAGTGTGCAAAAGATTATGTTAGTTCAGGGTACCGGAGGCTTGATTGCTGGTGCCGCTTCATCCTGTATTACAACCCCGTTCGATACTATCAAGACAAGATTACAGGTGACGGGACATGAACATAGAAGCTCTATAAAACAGGTAGCTAAAGATTTAATGAACGAAGATGGTTGGAAAGGCTTTTATAGAGGGTTTGGTCCGAGATTATTTAGCATGTCAATGTGGGGTACTTCAATGATATTGACATACGAGTACCTAAAGCGCGTGTGTACTAAAGATGAATAG 945 0.4508 MAQSFGQTEINWDKLDKTKFYVIGAGLFTGVAVALFPVSVVKTRLQVATRDSIEKSAFSVAKGLLKTDGVPGLYRGFGTVISCAIPARIIFLTALETTKSASFRMLEPLKLSETSQAAIANGVAGMTSSLVAQSVFVPMDVVCQKLMVQGYSGHAQYSGGLDVVRKVLKTEGVRGLYRGFGLSAITYSPSSAVWWASYGTSQRLMWKFLGHDNPSDGNTPSVQKIMLVQGTGGLIAGAASSCITTPFDTIKTRLQVTGHEHRSSIKQVAKDLMNEDGWKGFYRGFGPRLFSMSMWGTSMILTYEYLKRVCTKDE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272377g00005 314 Pfam Mitochondrial carrier protein 119 207 IPR018108 -
Stsc272377g00005 314 Pfam Mitochondrial carrier protein 230 313 IPR018108 -
Stsc272377g00005 314 Pfam Mitochondrial carrier protein 25 101 IPR018108 -
Stsc272377g00005 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 313 - -
Stsc272377g00005 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Stsc272377g00005 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Stsc272377g00005 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Stsc272377g00005 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Stsc272377g00005 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Stsc272377g00005 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Stsc272377g00005 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Stsc272377g00005 314 Gene3D Mitochondrial carrier domain 22 314 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272377g00005 Stsc-Chr272377 27422 30525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272377g00005 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 70.684 2.81e-162 453