Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272377g00004 ATGATGATGCGGTTCTCTTTGATACTACAGCACAATGTATCACTTCATACTTGCTATTGCTTTGTGCTCTTATTCCTACTTTTCTTCTCTTCATTATCATCATCAGAAGCTTATGATGCACTTGACCCATATGGAAATATCACAATCAAATGGGATCTTGTTGGATGGCAACCAGATGGTTATATTGCCATTGTGACAATAAACAACTACCAACAATATCGCCATATTCCTGCACCTGGGTGGTCACTAACATGGACATGGGCCGAGAAAGAGCTTATATGGAACATCATAGGAGCCATGACTACTAAACAAGGAAACTGTTCACGGTTTAAGGGATACCACCCACGTTCTTGTGAAAAGAGTCCAACAGTTGTGGATTTACTTCCCAGCACACCTTACAACCAGAAAGTTCCAAATTGTTGCAAAGGTGGAGTGCTTACTTCATGGGCTCAGGATCCAAAAAATGCAGTTGCATCGTTTCAACTCACTGTTGGTCGTGCTGGAACCACAAACCGAACCGTCCGAGTACCAAGGAACTTCACCTTGAATGCCCCCGGTTCTGGTTATACTTGCGGCCAAGCCAAGATTGTTAGACCAACTTTGTTCATTACACTGGACAAACGGAGAGTCACCCAAGCACTAATGACATGGAACGTGACATGCACGTATTCACGTTTTCTAGCTCAAAGGGCTGCTCCCACTTGTTGTGTCTCCCTCTCATCTTTCTATAACGACACTAGAGTGCCTTGCCCAACATGCTCATGTGCCTGCAAGACCAACTCAACCTGTCTCAAGTAA 798 0.4411 MMMRFSLILQHNVSLHTCYCFVLLFLLFFSSLSSSEAYDALDPYGNITIKWDLVGWQPDGYIAIVTINNYQQYRHIPAPGWSLTWTWAEKELIWNIIGAMTTKQGNCSRFKGYHPRSCEKSPTVVDLLPSTPYNQKVPNCCKGGVLTSWAQDPKNAVASFQLTVGRAGTTNRTVRVPRNFTLNAPGSGYTCGQAKIVRPTLFITLDKRRVTQALMTWNVTCTYSRFLAQRAAPTCCVSLSSFYNDTRVPCPTCSCACKTNSTCLK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272377g00004 265 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
Stsc272377g00004 265 PIRSF COBRA 9 265 IPR006918 GO:0010215|GO:0016020
Stsc272377g00004 265 PANTHER PROTEIN COBRA 24 264 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272377g00004 Stsc-Chr272377 23892 25389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272377g00004 23 261 COBRA Gene Family AT3G02210 68.619 3.56e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272377g00004 - - gmx:100783820 385.571