Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272377g00002 ATGAGGCTTGTCATAATAACTCTCTGTGTTATAGTTCTGTTCTCGTATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTCCGGCACATCCCGAATCCCGGATGGACCCTAGGGTGGTCATGGGCTAAAAAAGAGGTTATATGGACCATGGTGGGATCTCAAACTACAGAGCAAGGAGATTGCTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAGCAATACTCAAACTGCTGCAAGGGTGGAGTGGTATCAGCATGGGGCCAAGATCCTTCGTCCGCAGTCTCGGCCTTCCAAGTGAGTGTTGGACAAGCTGGCACCTCCAACAAGACAGTTAAACTCCCCAAAAACTTCACTCTCTTGGCTCCAGGACCTGGCTACACCTGTGGTCCTGCTAAGATTGTTCCATCCACTGTTTTCCTTACACAAGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTAGAAAGAACCCGAGTTGCTGTGTGTCATTGTCATCCTTCTACAATGAAACCATTACCCCTTGTCCTACTTGTGCCTGTGGTTGCCAGAACAAGAAGAATTGTGTCAAGAGTGACTCGAAATATCTAAAGACAGCAGGCGCTCACACTCCGAGGAGAGACAATGATGCATTGCTGCAGTGCACTCATCATATGTGCCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTATTGGCGAGTGAAGATCGCCATAACCAACTTCAACTACAGAATGAATTACACCCTCTGGACTCTCGCCGTCCAGCATCCGAATCTCAACAATATCACCCAAGTTTTCAGCTTTGATTACAGGCCAATTCTTCCCTATGAGTCCATCAATGATACTGGTATGTTCTATGGCATGAAATTCTATAATGATCTACTAATGGAAGCTGGACCATCTGGGAATGTTCAATCCGAAGTGCTTCTTCGAAAGGATCAAGATACCTTCACGTTCAAGCAAGGATGGGCGTTTCCTCGCAAGGTTTATTTCAATGGTGAAGAATGCATGCTTCCACCACCTGATACCTACCCATTCCTCCCCAATGCTGCTCCTGTAAAGCTACTTAACTTACCATCACTCATTTTCTTCTTGCTTCTCTTGCTAGCAGTTTTGTGA 1296 0.4568 MRLVIITLCVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMSNFQMFRHIPNPGWTLGWSWAKKEVIWTMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVSAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTVFLTQDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNCVKSDSKYLKTAGAHTPRRDNDALLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTLWTLAVQHPNLNNITQVFSFDYRPILPYESINDTGMFYGMKFYNDLLMEAGPSGNVQSEVLLRKDQDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNAAPVKLLNLPSLIFFLLLLLAVL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272377g00002 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Stsc272377g00002 431 PANTHER PROTEIN COBRA 7 424 IPR006918 GO:0010215|GO:0016020
Stsc272377g00002 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272377g00002 Stsc-Chr272377 15190 17685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272377g00002 19 431 COBRA Gene Family AT3G29810 66.265 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272377g00002 - - gmx:100783410 819.305