Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272366g00005 ATGGACACTCCTTCAGATTACCCTCTCTCACTCCTTCTTCTACTCCTTTCCCTCCTGCCTCTCTTAACCTTCTTCCTCTTCCACCGCCGCCGCCACTCCTCCTCCCGCCGCCACCCTCCAGGACCACCGGGATGGCCAATTTTCGGCAACTTATTCCAGCTCGGAGACATGCCACACCGCACCATCGCCAACCTAAGCAATACGTACGGCCCCGTCGTGCGCCTCCAGCTGGGAGCTATCAACACCGTCGCCATTCTCTCCGCCAAAACCGCCGCCGAGTTCTTCAAGTCCCACGACCACAACTTCGCCGACAGAACAATCATCCAAACCATGCGAGTCCACAACTACGACAAGTCCTCTCTAGCCCTCGCCCCTTACGGCCCTCACTGGCGCCTCATGCGCCGCCTCCTCACCGTCGACATGCTGGTGGCCAAACGCATCAACGACACCGCCCCCGTCCGGCGGAGGTGCGTGAACGACATGGTTTCCTGGGTAGCAAAAGAAGCTGAAAAAGTAAAAGGCGGCGAAGGTGTCCACGTGGCAAGATTCGTGTTCTTGATGTCGTTCAACCTGTTCGGGAACCTTCTGCTTTCCCGGGACATGTTTGACCCGGAATCGGAGACGGGTTCGGAGCTGTTTGAGGCAATGATGGGGCTTTTGGAGTGGACAGGGCACCCCAACGTGGCGGACGTGTTCCCGTGGCTTGGGTGGGTGGACCCACAAGGGCTGCAGCGGAGGATGAAGAGAGACATGGGAAAAGCCATTGAGATTGCTTCCAGATACGTCAACGAGCGCTTGGAGATTCAGCATGGCGATGATGGCGGTTTCTCTCCTAAGAAGGATTTCTTGGATGTTCTTATTGATTTTCAGAGCGGTGGCACTGAGGAGGCACGAAATATCTCCGACAAGGACCTCAACGTATTCATATTGGAAATGTTCATGGCTGGATCAGAAACTACAAGTAGCACGATAGAATGGGCTCTAACGGAGCTTCTCTGCAACCGGGACTGCCTGAGGAAGGTAAAATCGGAGCTCAATGGAGTGGTTGGAACCGCAAGAGAGTTGGAAGAGAGTGACATAGAAAACCTGCCATACCTTCAAGCTGTGGTGAAAGAAACGCTTCGCTTGCACCCTCCTATTCCCTTGCTTGTTCCTCGAAGGGCCATTCAGGACACACACTTCATGGGCTACTACATACCAAAAGACACGCAGGTCTTCGTGAATGTGTGGGCCATTGGAAGGGACCCACATGCGTGGAAAGACCCTTTGACCTTCAACCCGGAGAGGTTTATTTCTTCTGAGAGTGAGTCAAAGCTTGATTACAAAGGTCAACACTATGAGTTCATTCCTTTTGGTGCTGGGAGGAGGATGTGTGCGGGGGTCCCACTGGCCCACAGGGTCCTCAACTTGGTGCTGGGTTCACTGCTACATCGCTTTGATTGGGAGCTTGATAGCCGTGTCACGCCATCAACCATGGACATGAGGGATAAATTGGGGATTACAATGAGGAAACTTGAGCCATTGCTTGCGGTGCCTAAATTTGTTCCTCCATCATGA 1557 0.5363 MDTPSDYPLSLLLLLLSLLPLLTFFLFHRRRHSSSRRHPPGPPGWPIFGNLFQLGDMPHRTIANLSNTYGPVVRLQLGAINTVAILSAKTAAEFFKSHDHNFADRTIIQTMRVHNYDKSSLALAPYGPHWRLMRRLLTVDMLVAKRINDTAPVRRRCVNDMVSWVAKEAEKVKGGEGVHVARFVFLMSFNLFGNLLLSRDMFDPESETGSELFEAMMGLLEWTGHPNVADVFPWLGWVDPQGLQRRMKRDMGKAIEIASRYVNERLEIQHGDDGGFSPKKDFLDVLIDFQSGGTEEARNISDKDLNVFILEMFMAGSETTSSTIEWALTELLCNRDCLRKVKSELNGVVGTARELEESDIENLPYLQAVVKETLRLHPPIPLLVPRRAIQDTHFMGYYIPKDTQVFVNVWAIGRDPHAWKDPLTFNPERFISSESESKLDYKGQHYEFIPFGAGRRMCAGVPLAHRVLNLVLGSLLHRFDWELDSRVTPSTMDMRDKLGITMRKLEPLLAVPKFVPPS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272366g00005 518 FunFam Cytochrome P450 76C4 30 511 - -
Stsc272366g00005 518 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 513 - -
Stsc272366g00005 518 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 Gene3D Cytochrome P450 24 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Stsc272366g00005 518 CDD CYP76-like 66 512 - -
Stsc272366g00005 518 Pfam Cytochrome P450 39 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272366g00005 518 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272366g00005 Stsc-Chr272366 33353 35507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272366g00005 26 512 Cytochrome P450 AT3G52970 45.040 2.22e-145 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272366g00005 K22983 - gmx:100785241 759.985