LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc272364g00003	AGTCTTCACATTGTATACATGGGATCACTTCCAAAGGGAGATTATTCTCCAACCTCCCACCATCTTAGTATGCTGCAACGAACTACTAATGATAACGATGCAAACAATCACATTCTTAGAAGTTATCATAGGAGTTTTAATGGTTTTGCTGCAATGATTACTCACCAACAAAGAGAAATGCTCTCAAAAATGGACAGAGTGGTTTCTGTTTTCCCAAGCAGAACACTGCAACTACACACTACAAGATCTTGGGACTTCATGGGATTCCAAGAATCGATAAAGAAAAACAATACTGGTGAGAGTGATGTTATAATCGGAGTCATAGACACCGGAATATGGCCAGAATCAGAAAGCTTCAACGATCATGGTGTCGGTCCTATTCCGAAAAAGTGGAAAGGCGCATGCGAAGGTGGCAAAAACTTCACATGTAACAATAAAATCATCGGTGCAAGACACTATCTAAACGAGAACGGCTCTGCAAGAGACGTTGTTGGTCATGGAAGCCACACAGCGTCAATTGCGGCAGGGAATAGAGTTTCGGATGCAAGCTTCTATGGGATTGCCGGAGGAGTAGCAAGAGGAGGTGCCCCATCGGCAAGAATTGCTGTTTATAGTGTGTGTGGCAGTGTAGGGTGCTCAGATAACGCTTTATTGGCTGCTTTTGATGATGCCATTGTTGATGGTGTAGACCTCATCACAATTTCAATTGGGACAGATGACCCAGTTCCCTTTGACAGAGACACCATAGCAATTGGATCTTTTCATGCAATGGGAAAAGGGATCCTTACCATAAATTCTGCAGGTAATTCTGGTTCTAAAGGTATAACATTCAGTGTATCACCTTGGTTATTCAGTGTTGCAGCGACCACCATGGATCGTAAAATCATCGATAAGGTTTTGCTTGGAAATGGATTAACACTCACGGGGAAGTCAATAAATGCCTTTGCATCAAATGGGACAAAGATTCCAGTGGTCCCGGGAAAGCTTGCTTCAAATCCAAATTGTCCATCAATTGAGGAAGCTGAATCATGTTCTGCTTTTTGTGTGGATCCCAAACGCATAAAAGGGAAAATTATCATGTGTAGAACTGTGTATGGTGATGTATCAGCTACTGCATATGGTGCATTTGGTGTAATTTTCATGTCTAATGAATTTGAGGCTAGAGTAGTCTCTTATCTTTCGTTAAGCATAGATTCCAAGGCTTATGATCTTGCTTTGGCTTATGCAACCTTCATAAATGATACTGTTATCATTGTTGCTGATTTTTCTTCTAGAGGACCCAATTCTTTTATCCCAGAAATTATGAAGCCGGACATAAGTGCTCCTGGTGTAGAAATTTTGGCTGCTTATTCACCTCTTGCATCACCGTCTGGAGATTCAAATGATAAGAGATCAGTGAAATACAACATACTTTCTGGAACTTCAATGTCATGCCCTCATGTTGCTGGCATAGCTGCATATGTTAAGGCTTTTCATCCTGATTGGTCTCCAGCAGCTATAAAGTCTTCTATCATGACAACTGCAAAACCAATGAATGGAATTGATGGTGAAGACATATTAGCCTTTAAAGAATTTGCTTATGGATCAGGGTTTGTGGATCCAATTAGAGCCATAAATCCCAGTCTAGTTTTTGATCATTCCAAAGATGACTATGTGAATTTACTTTGCAGTATGGGACACGACACATCTACTGTTCGACTAATATCAGGTGATAATAGCACATCTTGCCCTTCATCGTCCCTTCATCTGCCAAGGGCAAAAGATTTTAATTATCCTTCAATTGTGACTAAAGTTGGACCAGTCGTGAAACCATTTATAGTTAATTTCACAAGAACAGTCACAAATGTTGGATTTGCTAACTCTAATGTTGGATTTGCTAACTCTACCTATACGGCTAGTGTTCAACAACATTCTAGCATGAACATCACTGTTGTGCCTAACATACTTAAGTTTAAATCTCTAAATGAGAAACAAACTTTTGTTGTTAATGTTAGAGGGATATTAAGTATTGACGAAGTGTTAATTTCATCATCACTAATGTGGACTGATGGAACACATAATGTAAGGTGTCCAATTGTTGCATTTGTTTGA	2091	0.3974	SLHIVYMGSLPKGDYSPTSHHLSMLQRTTNDNDANNHILRSYHRSFNGFAAMITHQQREMLSKMDRVVSVFPSRTLQLHTTRSWDFMGFQESIKKNNTGESDVIIGVIDTGIWPESESFNDHGVGPIPKKWKGACEGGKNFTCNNKIIGARHYLNENGSARDVVGHGSHTASIAAGNRVSDASFYGIAGGVARGGAPSARIAVYSVCGSVGCSDNALLAAFDDAIVDGVDLITISIGTDDPVPFDRDTIAIGSFHAMGKGILTINSAGNSGSKGITFSVSPWLFSVAATTMDRKIIDKVLLGNGLTLTGKSINAFASNGTKIPVVPGKLASNPNCPSIEEAESCSAFCVDPKRIKGKIIMCRTVYGDVSATAYGAFGVIFMSNEFEARVVSYLSLSIDSKAYDLALAYATFINDTVIIVADFSSRGPNSFIPEIMKPDISAPGVEILAAYSPLASPSGDSNDKRSVKYNILSGTSMSCPHVAGIAAYVKAFHPDWSPAAIKSSIMTTAKPMNGIDGEDILAFKEFAYGSGFVDPIRAINPSLVFDHSKDDYVNLLCSMGHDTSTVRLISGDNSTSCPSSSLHLPRAKDFNYPSIVTKVGPVVKPFIVNFTRTVTNVGFANSNVGFANSTYTASVQQHSSMNITVVPNILKFKSLNEKQTFVVNVRGILSIDEVLISSSLMWTDGTHNVRCPIVAFV	696

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc272364g00003	696	Gene3D	Peptidase S8/S53 domain	102	551	IPR036852	GO:0004252\|GO:0006508
	Stsc272364g00003	696	ProSitePatterns	Serine proteases, subtilase family, serine active site.	473	483	IPR023828	-
	Stsc272364g00003	696	Gene3D	-	555	695	-	-
	Stsc272364g00003	696	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	4	693	IPR045051	-
	Stsc272364g00003	696	CDD	PA_subtilisin_like	299	409	-	-
	Stsc272364g00003	696	CDD	Peptidases_S8_3	76	508	IPR034197	-
	Stsc272364g00003	696	Pfam	Fibronectin type-III domain	588	693	IPR041469	-
	Stsc272364g00003	696	ProSiteProfiles	Serine proteases, subtilase domain profile.	83	538	-	-
	Stsc272364g00003	696	PRINTS	Subtilisin serine protease family (S8) signature	100	119	IPR015500	-
	Stsc272364g00003	696	PRINTS	Subtilisin serine protease family (S8) signature	162	175	IPR015500	-
	Stsc272364g00003	696	PRINTS	Subtilisin serine protease family (S8) signature	472	488	IPR015500	-
	Stsc272364g00003	696	Pfam	Subtilase family	101	509	IPR000209	GO:0006508\|GO:0008236
	Stsc272364g00003	696	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	79	IPR037045	-
	Stsc272364g00003	696	Pfam	Peptidase inhibitor I9	3	79	IPR010259	-
	Stsc272364g00003	696	Gene3D	-	292	412	-	-
	Stsc272364g00003	696	SUPERFAMILY	Subtilisin-like	81	539	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc272364g00003	Stsc-Chr272364	36714	38805	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc272364g00003	2	695	Subtilisin-like Serine Gene Family	AT5G59100	51.250	0.0	706

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc272364g00003	-		-	qsa:O6P43_020998	746.117