Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272364g00001 ATGGCTGCTTTTGATGTTGCAAGAGGAGGCGTCCCATCGGCAAGAATTGCTGTTTATAATGTGTGTAGCGGCGCGGGGTGTTTAGGTCATGCTATATTGGCTGCTTTTGATGATTCCATTGCTGATGGTGTGGACCTCGTCACAATTTCAATTTCGCCAAATCTCCCAATTCCCTATGATACAGACCCCATAGCAATTGGATCTTTTCATGCAATGGAAAAAGGAATCCTTACCATAAATTCTGCAGGTAACTCTGGTCCTAAAGGTGTAACATTTAGTGTGTCACCTTGGTTGTTCAGTGTTGCAGCTAGCACCATGGATCGTAGAATTATAGATAAGGCTTTGCTTGGCAATGGATTAACGCTCTTCGGAAAGTCAATAAACTCGTTTCCATCAGATGGGAAAAATATTCCATTGGTTCATGGAAATGGCGGTGGATATCCATCGGCTGATGAATTAGGTTTATTGGGCTCAATTGTGGCTTCTAACGTATTTGAAGCTGATGTTGTTTCTTATCCTTCACTATTCATAGATTCAAAGGCTTATAATCTTGCCAAGGCTTATGCAAATTCCAATACTACCCCTCAAGCTGAGATATTCGCTAGTGAAGCCTTTAATAACACCATTGCTCCAATTATTGCCGATTTCTCTTCCAGAGGACCCAATACTATTATCCCAGAAATTATGAAGCCGGACATAAGTGCTCCTGGTGTAGAAATTTTGGCTGCTTATTCATCCATTGCATCACCGTCTAGCGATTCAAACGATAAAAGATCAGTGAAATATAACATACTTTCTGGAACTTCAATGTCATGCCCTCATGTTGCTGGCATAGCTGCATTTGTTAAGGCTTTTCATCCTAATTGGTCTCCGGCAGCTACAAAATCTTCTATCATGACGACTGCAAAACCAATGAATAAAACTGATGATAATGATAAAGAATTTTCCTACGGATCAGGGTTTGTGGATCCAGTTAAAGCCATAAATCCTGGTCTAGTTTTTTATCTTTCCAAAGATGACTATGTGAATTTACTTTGCAGTATCGGTTACGACACAGCTAAAGTTCGACAAATATCAGGTGATAATAGCACTTTTTGCCCTTCAACTTCATCTGCCAAGGGCAAAAGATTTTAA 1134 0.4012 MAAFDVARGGVPSARIAVYNVCSGAGCLGHAILAAFDDSIADGVDLVTISISPNLPIPYDTDPIAIGSFHAMEKGILTINSAGNSGPKGVTFSVSPWLFSVAASTMDRRIIDKALLGNGLTLFGKSINSFPSDGKNIPLVHGNGGGYPSADELGLLGSIVASNVFEADVVSYPSLFIDSKAYNLAKAYANSNTTPQAEIFASEAFNNTIAPIIADFSSRGPNTIIPEIMKPDISAPGVEILAAYSSIASPSSDSNDKRSVKYNILSGTSMSCPHVAGIAAFVKAFHPNWSPAATKSSIMTTAKPMNKTDDNDKEFSYGSGFVDPVKAINPGLVFYLSKDDYVNLLCSIGYDTAKVRQISGDNSTFCPSTSSAKGKRF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272364g00001 377 ProSitePatterns Serine proteases, subtilase family, serine active site. 267 277 IPR023828 -
Stsc272364g00001 377 ProSiteProfiles Serine proteases, subtilase domain profile. 1 328 - -
Stsc272364g00001 377 SUPERFAMILY Subtilisin-like 6 332 IPR036852 GO:0004252|GO:0006508
Stsc272364g00001 377 Gene3D - 157 206 - -
Stsc272364g00001 377 Gene3D - 107 144 - -
Stsc272364g00001 377 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 369 IPR045051 -
Stsc272364g00001 377 Pfam Subtilase family 8 320 IPR000209 GO:0006508|GO:0008236
Stsc272364g00001 377 Gene3D Peptidase S8/S53 domain 3 106 IPR036852 GO:0004252|GO:0006508
Stsc272364g00001 377 Gene3D Peptidase S8/S53 domain 207 341 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272364g00001 Stsc-Chr272364 25634 26980 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272364g00001 7 364 Subtilisin-like Serine Gene Family AT5G59100 49.118 2.20e-123 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272364g00001 - - qsa:O6P43_020998 407.142