Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272351g00003 ATGGGGGTGGGGGTACTTTTGTCATTGAATCTTCAGCTGGTGAAGCTCTTCATCATTGGCTTTGTTGTGACAGTGCAAGGATCCCAAGGTTCTATTTTATCCCCATCTCCGGCATTCGCTCCGGCCATTCATCCCAGAGGAGAAACACTTGGCCATGTCCATCATGGACAGTCATGGAGAAGCAATGCACCGAGCTCCCCAGCGGATCCATACGGGTTTGTCCTGTCTCCAAATCCATCAACTTTGCCTGTGAATCCTTCCCCTAGAACCATTGCTCCAAGCTCTCTGGAAGTACCAAATGGGTCATTCTCGCCTACTCCAGTTTCATCTCCTATTCCATCAATATCTCCCGGTACTAGTCCAACCACCATAACATTATCACCTCCGCACGAGGCTGCCCCTATATCGGCAACTGATCAAGGGAATGCACCACCACTTCCGTCGATACAACCGAGTCCACCTCAAAGGAAAGTACCTCCTGTTAGGCCTCCTGAACCTTCTCCAATTTCTCCAGCTCAACCACCAGAACCTTTTGGTAAGTTGCCAAATAATTCACCAGTGAGCCAACCAATTGAACATGGAAGTTTTCCCCCTATGGTTGAGAAGAGGAATGCTAGCAAGAGTGTCACCCCAGACCGAATCTCACCAGCTCCAACTGCAGTACCATCTACCAAATTGCCTAAGTTTTCACCAGTAAGTCAACCAGTTGAAAATGGCAGTTTCCCTCCTAATATTCACATAAAGGCTCCAAAGAAGGGCCATTCACTGAAGCCAATTGCACCAGCTCCTGTTGCAGTCAGTTTGCCCGAATTTCCACCGAGTCAGCCACATGAACATGGAAGCTTACCTCCAACTGTTCACAAACAGGAGCCAGTTTCACAAGCTCCAGTTGCTTTACCTCCTGCAACTTTGCCAGAAAATTCACCGGTGAGCCAACCGATTCATCAAGGAAGTTTTCCTCCCAATGTTCATAACAGAACTGTAAATAAGGGTCATACTAACACTCCCACCACAGATCCAGTATCACCAAACTCTTCTGCATCCCCGCCGTCAAAAACGGAAAATAACCATCCAATAGGTGGTCCTGTTCTTCCAAAAATAACTCCATCCATATCACCTGCACAAGTTACACCACCAAAAATTGCACATCCAATAAGTCCACCACCTTTCCACCCCGTTATACCAGCAGTATCTCCATCAAAATTACCAGCACCTGTTGTGTCTCCCACACTGACTCCCTCCAGAAGATCTAATTGGAAAAGTACCGGCAAACCAGTTTCAGCACCATTGTACAAAACACCAAAGCCACTACCAGCTATAGTACATTCCTCTGCTCTAGTTCCAGTTGCTTCGCCTCCTGTGAATTTGCCCGAAAATTCACCTGCCAACCAACCTATTCATCAAGGAAGTTTTCCTCCCAATGTTCATAACAGAACTGTAAATAAGGGCCATGCTAACACTCCCACCACCGAGCCAGTATCACCAATTGCATCCCCGCCATCAAAAATGGAAAATAACCATCCAATACGCCGTCCTGTTCTTCCAAAAGTAACTCCATCCATATCACCTGCACAAGTTACACCACCAAAAATTGCATATCCAATAAATCCACCACCTTTTCACCCCATGATACCAGCAGTATCTCCATCAAAATTACCAGTCCCAGTTGCATCACCTCCTGTGAATTTGCCTGAAAATTCACCAGTCAGCCAACCTATTCATCAAGGAAGTTTAGCTCCTGTTGTTCATAACAGAACTGAAAATAAGGGTCATATTCACACCCAAGAACCAGCATCAACAAATTTCCTTGCACCCCCACCATGGAAAATGGAAAATAACCAGCCAGTTGGCAGTCCTGTTTTTCCAAAAATAACTCCGTCCATATCACCTGCACAAGTTGCACCACCACCTTTCCACCCAGTTATACCAACAGTATCTCCATCAAAATTGCCAGCACCTGTTGTCTCTCCGGCACTAACTCCTTCCGGAAGCTTTAATTGGAAACGAAATGGAGAACCAGTTTTGGCACCTTTGTACAAAGTACCAAAGCCGCTACCAGCTGTAGTACATTCTCCTGTTCAAGCCCCTGCTGTACATAATTCAAGGCAGTTCCATCATGCTTCTGTGCCCCCGGTTTCTTCACCTAAATCTTCTTCAAATAAAGAATATCATTCTCCTGCATCTCCACCTTTAACCACATCTTATAATCATCACTATACAAGGAGTATAGCCGCCAGTCCTGCTCCTACATCATCATATTTCGTTTCTCCTCCGACTTCAGTCCATGGAGATCACCCGATTCCTCCTTCATCACTGCCGACAACTGGACGAACACATCATGCTTCACCACCATCAAGCACAGGTCCTTCGGTTTCCCCGTTTGCATTCCCTGTTACATCACCAGCCAGCCAGGTTTCGCCTGCTCCGTCTCCATCCTTCATAATATCCCCTCACCCAACCAAAATTCTATTTAATCCTCCTAAAGTATCTCCTTCTCGGTCTCCTCGGTCTCCTTCCGAGAGTCCTAAGAAGCCAATCCTGCCTCAAATTCACACACTGCCGCCACCGCCTCCTAATGAAGATTGTTTATCAACTATTTGCTCAGAGCCTTACACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTTCTGCCCATGAGAGTTGGTCTTCGCCTTGGTGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCGGAGATTGCTGCTGGGGTTTCCATGACACAAAGTCAAGTTCGGATTATGGGAGCCGAAGCGGCAAGCCAAGATCCAGACAAAACTGATGCTCTCATTTTCTTGGTGCCGACCGGGGAAGGCTTTGATCACACCACAGCCTTATTGAATTCTGAGAGATTTTGGCAGAAAAAGGTTGCAATAAAATCTTCTTACTTTGGTAGCTATGAAGTCTTATACGTTAGCTATCCAGGTTTACCACCATCTCCTCCTATACCACCTTCTAGTATTTCCATGATAGATGGTGGTCCATATTCAAATAATGGCAACAATGGAAGAATGATAAAGCCCCTTGGCGTCGACATACAGAAGAGGCAGCACAAAGGTGGACTTAGTAGGGGCATCATTGCAATTATTGCTCTATCGGTGCTTCTCGCCGTTGTTTTATTATTGGCTGCTGTTTTGGCCTTGTTCAAGTACAGACATCATGTAAGCCAGCCGACATCAACCCCGCGTGTTTCTCCACGTTCCATTGCCAAAACACAAGGAACTACTGAATCACTAGCAGCTGGTGGACTCGCTTCAGCCTCATCATCATTTCGATCAAGCATTGCTGCTTACAAAGGATCTGCTAAGACTTTCAGTGCGAATGACATCGAGAAAGCCACCGATAACTTTAATGATTCAAGGATACTTGGAGAAGGTGGTTTTGGTCGGGTTTATAGTGGTATCTTTGAAGATGGGACAAAAGCAGCAGTCAAGGTTCTTAAAAGGGAGGATCATCATGGTGATCGAGAATTCCTAGCTGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATTTGGTTAAGTTGATTGGTATATGCACCGAGGTTAGCTTCCGCTGCCTGGTCTATGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAGGGAAAACAGTCCACTTGATTGGAGTGCTAGGATTAAGATCGCACTCGGTGCAGCACGCGGCCTGGCTTATCTGCATGAAGATTCGAGCCCCCCTGTCATACACAGGGACTTCAAGTCTAGTAATATCTTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTAGCTAGAACTGCGGCCGATGAAGAGAACAGACACATCTCAACCCGTGTCATGGGAACTTTCGGATATGTGGCTCCGGAGTATGCAATGACCGGCCATCTTCTTGTGAAGAGTGATGTCTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTAGATATGTCGCAAGCCCCCGGTCAAGAGAATCTCGTGGCATGGGCTCGTCCCTTACTCACAAATAAAGAAGGTTTGGAAGCAATAATAGACCCATCTCTGGGGACTGATGTGCCTTGGGATAGTGTGGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTTCAACCAGAGGTCTCGGACCGGCCTTTCATGGGTGAGGTTGTTCAGGCTCTAAAACTTGTGAGCAATGAATGTGATGAAGCAAAAGAAGCAGGTACTAGAAATCCTAGCCAGGAGGATTTATCTGTTGATTTGGACAATGTCTCTAGTCAACTACCTGATCATTTCCAACGGCTATTCTCCGCCGCGAACTATGCTTCAGGAAGTGATATCGAAAAAGGCTTGTCATCATTAGAGATGTTCAGCTCATCAGCAAGATTTAGAAGGCAAGATTCTGGCTCATTTCGACGGCACTCCTATTCGGGTCCTTTGAGAACAGGAAGAAGCCAAAGGTTGTGGCAGGTTATTGGCCGGCTTTCGGGTAGTGTAAGTGAACACAGAACCATCTCCAAGTTATGA 4542 0.4613 MGVGVLLSLNLQLVKLFIIGFVVTVQGSQGSILSPSPAFAPAIHPRGETLGHVHHGQSWRSNAPSSPADPYGFVLSPNPSTLPVNPSPRTIAPSSLEVPNGSFSPTPVSSPIPSISPGTSPTTITLSPPHEAAPISATDQGNAPPLPSIQPSPPQRKVPPVRPPEPSPISPAQPPEPFGKLPNNSPVSQPIEHGSFPPMVEKRNASKSVTPDRISPAPTAVPSTKLPKFSPVSQPVENGSFPPNIHIKAPKKGHSLKPIAPAPVAVSLPEFPPSQPHEHGSLPPTVHKQEPVSQAPVALPPATLPENSPVSQPIHQGSFPPNVHNRTVNKGHTNTPTTDPVSPNSSASPPSKTENNHPIGGPVLPKITPSISPAQVTPPKIAHPISPPPFHPVIPAVSPSKLPAPVVSPTLTPSRRSNWKSTGKPVSAPLYKTPKPLPAIVHSSALVPVASPPVNLPENSPANQPIHQGSFPPNVHNRTVNKGHANTPTTEPVSPIASPPSKMENNHPIRRPVLPKVTPSISPAQVTPPKIAYPINPPPFHPMIPAVSPSKLPVPVASPPVNLPENSPVSQPIHQGSLAPVVHNRTENKGHIHTQEPASTNFLAPPPWKMENNQPVGSPVFPKITPSISPAQVAPPPFHPVIPTVSPSKLPAPVVSPALTPSGSFNWKRNGEPVLAPLYKVPKPLPAVVHSPVQAPAVHNSRQFHHASVPPVSSPKSSSNKEYHSPASPPLTTSYNHHYTRSIAASPAPTSSYFVSPPTSVHGDHPIPPSSLPTTGRTHHASPPSSTGPSVSPFAFPVTSPASQVSPAPSPSFIISPHPTKILFNPPKVSPSRSPRSPSESPKKPILPQIHTLPPPPPNEDCLSTICSEPYTNSPPGAPCRCVLPMRVGLRLGVSLYTFFPLVSELASEIAAGVSMTQSQVRIMGAEAASQDPDKTDALIFLVPTGEGFDHTTALLNSERFWQKKVAIKSSYFGSYEVLYVSYPGLPPSPPIPPSSISMIDGGPYSNNGNNGRMIKPLGVDIQKRQHKGGLSRGIIAIIALSVLLAVVLLLAAVLALFKYRHHVSQPTSTPRVSPRSIAKTQGTTESLAAGGLASASSSFRSSIAAYKGSAKTFSANDIEKATDNFNDSRILGEGGFGRVYSGIFEDGTKAAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDRENSPLDWSARIKIALGAARGLAYLHEDSSPPVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTNKEGLEAIIDPSLGTDVPWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDEAKEAGTRNPSQEDLSVDLDNVSSQLPDHFQRLFSAANYASGSDIEKGLSSLEMFSSSARFRRQDSGSFRRHSYSGPLRTGRSQRLWQVIGRLSGSVSEHRTISKL 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 87 129 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 706 735 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 50 387 - -
Stsc272351g00003 1513 Pfam Protein tyrosine and serine/threonine kinase 1130 1399 IPR001245 GO:0004672|GO:0006468
Stsc272351g00003 1513 FunFam receptor-like serine/threonine-protein kinase ALE2 1099 1201 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 407 424 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 226 240 - -
Stsc272351g00003 1513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1248 1260 IPR008271 GO:0004672|GO:0006468
Stsc272351g00003 1513 PRINTS Proline rich extensin signature 280 305 - -
Stsc272351g00003 1513 PRINTS Proline rich extensin signature 105 121 - -
Stsc272351g00003 1513 PRINTS Proline rich extensin signature 142 154 - -
Stsc272351g00003 1513 PRINTS Proline rich extensin signature 159 180 - -
Stsc272351g00003 1513 PRINTS Proline rich extensin signature 87 99 - -
Stsc272351g00003 1513 PRINTS Proline rich extensin signature 214 231 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 750 811 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 824 857 - -
Stsc272351g00003 1513 ProSiteProfiles Protein kinase domain profile. 1126 1402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272351g00003 1513 SUPERFAMILY Protein kinase-like (PK-like) 1107 1400 IPR011009 -
Stsc272351g00003 1513 PANTHER OS01G0750732 PROTEIN 854 1427 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 771 811 - -
Stsc272351g00003 1513 ProSitePatterns Protein kinases ATP-binding region signature. 1132 1154 IPR017441 GO:0005524
Stsc272351g00003 1513 Gene3D Transferase(Phosphotransferase) domain 1 1202 1424 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 702 735 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 480 517 - -
Stsc272351g00003 1513 FunFam Receptor-like serine/threonine-protein kinase ALE2 1202 1417 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 308 355 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 407 432 - -
Stsc272351g00003 1513 MobiDBLite consensus disorder prediction 146 181 - -
Stsc272351g00003 1513 Gene3D Phosphorylase Kinase; domain 1 1098 1201 - -
Stsc272351g00003 1513 CDD STKc_IRAK 1132 1400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272351g00003 Stsc-Chr272351 26978 36065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272351g00003 434 1509 Receptor kinase-like Gene Family AT5G56890 49.468 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc272351g00003 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272351g00003 - - psat:127136544 1396.72