Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272351g00003 | ATGGGGGTGGGGGTACTTTTGTCATTGAATCTTCAGCTGGTGAAGCTCTTCATCATTGGCTTTGTTGTGACAGTGCAAGGATCCCAAGGTTCTATTTTATCCCCATCTCCGGCATTCGCTCCGGCCATTCATCCCAGAGGAGAAACACTTGGCCATGTCCATCATGGACAGTCATGGAGAAGCAATGCACCGAGCTCCCCAGCGGATCCATACGGGTTTGTCCTGTCTCCAAATCCATCAACTTTGCCTGTGAATCCTTCCCCTAGAACCATTGCTCCAAGCTCTCTGGAAGTACCAAATGGGTCATTCTCGCCTACTCCAGTTTCATCTCCTATTCCATCAATATCTCCCGGTACTAGTCCAACCACCATAACATTATCACCTCCGCACGAGGCTGCCCCTATATCGGCAACTGATCAAGGGAATGCACCACCACTTCCGTCGATACAACCGAGTCCACCTCAAAGGAAAGTACCTCCTGTTAGGCCTCCTGAACCTTCTCCAATTTCTCCAGCTCAACCACCAGAACCTTTTGGTAAGTTGCCAAATAATTCACCAGTGAGCCAACCAATTGAACATGGAAGTTTTCCCCCTATGGTTGAGAAGAGGAATGCTAGCAAGAGTGTCACCCCAGACCGAATCTCACCAGCTCCAACTGCAGTACCATCTACCAAATTGCCTAAGTTTTCACCAGTAAGTCAACCAGTTGAAAATGGCAGTTTCCCTCCTAATATTCACATAAAGGCTCCAAAGAAGGGCCATTCACTGAAGCCAATTGCACCAGCTCCTGTTGCAGTCAGTTTGCCCGAATTTCCACCGAGTCAGCCACATGAACATGGAAGCTTACCTCCAACTGTTCACAAACAGGAGCCAGTTTCACAAGCTCCAGTTGCTTTACCTCCTGCAACTTTGCCAGAAAATTCACCGGTGAGCCAACCGATTCATCAAGGAAGTTTTCCTCCCAATGTTCATAACAGAACTGTAAATAAGGGTCATACTAACACTCCCACCACAGATCCAGTATCACCAAACTCTTCTGCATCCCCGCCGTCAAAAACGGAAAATAACCATCCAATAGGTGGTCCTGTTCTTCCAAAAATAACTCCATCCATATCACCTGCACAAGTTACACCACCAAAAATTGCACATCCAATAAGTCCACCACCTTTCCACCCCGTTATACCAGCAGTATCTCCATCAAAATTACCAGCACCTGTTGTGTCTCCCACACTGACTCCCTCCAGAAGATCTAATTGGAAAAGTACCGGCAAACCAGTTTCAGCACCATTGTACAAAACACCAAAGCCACTACCAGCTATAGTACATTCCTCTGCTCTAGTTCCAGTTGCTTCGCCTCCTGTGAATTTGCCCGAAAATTCACCTGCCAACCAACCTATTCATCAAGGAAGTTTTCCTCCCAATGTTCATAACAGAACTGTAAATAAGGGCCATGCTAACACTCCCACCACCGAGCCAGTATCACCAATTGCATCCCCGCCATCAAAAATGGAAAATAACCATCCAATACGCCGTCCTGTTCTTCCAAAAGTAACTCCATCCATATCACCTGCACAAGTTACACCACCAAAAATTGCATATCCAATAAATCCACCACCTTTTCACCCCATGATACCAGCAGTATCTCCATCAAAATTACCAGTCCCAGTTGCATCACCTCCTGTGAATTTGCCTGAAAATTCACCAGTCAGCCAACCTATTCATCAAGGAAGTTTAGCTCCTGTTGTTCATAACAGAACTGAAAATAAGGGTCATATTCACACCCAAGAACCAGCATCAACAAATTTCCTTGCACCCCCACCATGGAAAATGGAAAATAACCAGCCAGTTGGCAGTCCTGTTTTTCCAAAAATAACTCCGTCCATATCACCTGCACAAGTTGCACCACCACCTTTCCACCCAGTTATACCAACAGTATCTCCATCAAAATTGCCAGCACCTGTTGTCTCTCCGGCACTAACTCCTTCCGGAAGCTTTAATTGGAAACGAAATGGAGAACCAGTTTTGGCACCTTTGTACAAAGTACCAAAGCCGCTACCAGCTGTAGTACATTCTCCTGTTCAAGCCCCTGCTGTACATAATTCAAGGCAGTTCCATCATGCTTCTGTGCCCCCGGTTTCTTCACCTAAATCTTCTTCAAATAAAGAATATCATTCTCCTGCATCTCCACCTTTAACCACATCTTATAATCATCACTATACAAGGAGTATAGCCGCCAGTCCTGCTCCTACATCATCATATTTCGTTTCTCCTCCGACTTCAGTCCATGGAGATCACCCGATTCCTCCTTCATCACTGCCGACAACTGGACGAACACATCATGCTTCACCACCATCAAGCACAGGTCCTTCGGTTTCCCCGTTTGCATTCCCTGTTACATCACCAGCCAGCCAGGTTTCGCCTGCTCCGTCTCCATCCTTCATAATATCCCCTCACCCAACCAAAATTCTATTTAATCCTCCTAAAGTATCTCCTTCTCGGTCTCCTCGGTCTCCTTCCGAGAGTCCTAAGAAGCCAATCCTGCCTCAAATTCACACACTGCCGCCACCGCCTCCTAATGAAGATTGTTTATCAACTATTTGCTCAGAGCCTTACACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTTCTGCCCATGAGAGTTGGTCTTCGCCTTGGTGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCGGAGATTGCTGCTGGGGTTTCCATGACACAAAGTCAAGTTCGGATTATGGGAGCCGAAGCGGCAAGCCAAGATCCAGACAAAACTGATGCTCTCATTTTCTTGGTGCCGACCGGGGAAGGCTTTGATCACACCACAGCCTTATTGAATTCTGAGAGATTTTGGCAGAAAAAGGTTGCAATAAAATCTTCTTACTTTGGTAGCTATGAAGTCTTATACGTTAGCTATCCAGGTTTACCACCATCTCCTCCTATACCACCTTCTAGTATTTCCATGATAGATGGTGGTCCATATTCAAATAATGGCAACAATGGAAGAATGATAAAGCCCCTTGGCGTCGACATACAGAAGAGGCAGCACAAAGGTGGACTTAGTAGGGGCATCATTGCAATTATTGCTCTATCGGTGCTTCTCGCCGTTGTTTTATTATTGGCTGCTGTTTTGGCCTTGTTCAAGTACAGACATCATGTAAGCCAGCCGACATCAACCCCGCGTGTTTCTCCACGTTCCATTGCCAAAACACAAGGAACTACTGAATCACTAGCAGCTGGTGGACTCGCTTCAGCCTCATCATCATTTCGATCAAGCATTGCTGCTTACAAAGGATCTGCTAAGACTTTCAGTGCGAATGACATCGAGAAAGCCACCGATAACTTTAATGATTCAAGGATACTTGGAGAAGGTGGTTTTGGTCGGGTTTATAGTGGTATCTTTGAAGATGGGACAAAAGCAGCAGTCAAGGTTCTTAAAAGGGAGGATCATCATGGTGATCGAGAATTCCTAGCTGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATTTGGTTAAGTTGATTGGTATATGCACCGAGGTTAGCTTCCGCTGCCTGGTCTATGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAGGGAAAACAGTCCACTTGATTGGAGTGCTAGGATTAAGATCGCACTCGGTGCAGCACGCGGCCTGGCTTATCTGCATGAAGATTCGAGCCCCCCTGTCATACACAGGGACTTCAAGTCTAGTAATATCTTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTAGCTAGAACTGCGGCCGATGAAGAGAACAGACACATCTCAACCCGTGTCATGGGAACTTTCGGATATGTGGCTCCGGAGTATGCAATGACCGGCCATCTTCTTGTGAAGAGTGATGTCTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTAGATATGTCGCAAGCCCCCGGTCAAGAGAATCTCGTGGCATGGGCTCGTCCCTTACTCACAAATAAAGAAGGTTTGGAAGCAATAATAGACCCATCTCTGGGGACTGATGTGCCTTGGGATAGTGTGGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTTCAACCAGAGGTCTCGGACCGGCCTTTCATGGGTGAGGTTGTTCAGGCTCTAAAACTTGTGAGCAATGAATGTGATGAAGCAAAAGAAGCAGGTACTAGAAATCCTAGCCAGGAGGATTTATCTGTTGATTTGGACAATGTCTCTAGTCAACTACCTGATCATTTCCAACGGCTATTCTCCGCCGCGAACTATGCTTCAGGAAGTGATATCGAAAAAGGCTTGTCATCATTAGAGATGTTCAGCTCATCAGCAAGATTTAGAAGGCAAGATTCTGGCTCATTTCGACGGCACTCCTATTCGGGTCCTTTGAGAACAGGAAGAAGCCAAAGGTTGTGGCAGGTTATTGGCCGGCTTTCGGGTAGTGTAAGTGAACACAGAACCATCTCCAAGTTATGA | 4542 | 0.4613 | MGVGVLLSLNLQLVKLFIIGFVVTVQGSQGSILSPSPAFAPAIHPRGETLGHVHHGQSWRSNAPSSPADPYGFVLSPNPSTLPVNPSPRTIAPSSLEVPNGSFSPTPVSSPIPSISPGTSPTTITLSPPHEAAPISATDQGNAPPLPSIQPSPPQRKVPPVRPPEPSPISPAQPPEPFGKLPNNSPVSQPIEHGSFPPMVEKRNASKSVTPDRISPAPTAVPSTKLPKFSPVSQPVENGSFPPNIHIKAPKKGHSLKPIAPAPVAVSLPEFPPSQPHEHGSLPPTVHKQEPVSQAPVALPPATLPENSPVSQPIHQGSFPPNVHNRTVNKGHTNTPTTDPVSPNSSASPPSKTENNHPIGGPVLPKITPSISPAQVTPPKIAHPISPPPFHPVIPAVSPSKLPAPVVSPTLTPSRRSNWKSTGKPVSAPLYKTPKPLPAIVHSSALVPVASPPVNLPENSPANQPIHQGSFPPNVHNRTVNKGHANTPTTEPVSPIASPPSKMENNHPIRRPVLPKVTPSISPAQVTPPKIAYPINPPPFHPMIPAVSPSKLPVPVASPPVNLPENSPVSQPIHQGSLAPVVHNRTENKGHIHTQEPASTNFLAPPPWKMENNQPVGSPVFPKITPSISPAQVAPPPFHPVIPTVSPSKLPAPVVSPALTPSGSFNWKRNGEPVLAPLYKVPKPLPAVVHSPVQAPAVHNSRQFHHASVPPVSSPKSSSNKEYHSPASPPLTTSYNHHYTRSIAASPAPTSSYFVSPPTSVHGDHPIPPSSLPTTGRTHHASPPSSTGPSVSPFAFPVTSPASQVSPAPSPSFIISPHPTKILFNPPKVSPSRSPRSPSESPKKPILPQIHTLPPPPPNEDCLSTICSEPYTNSPPGAPCRCVLPMRVGLRLGVSLYTFFPLVSELASEIAAGVSMTQSQVRIMGAEAASQDPDKTDALIFLVPTGEGFDHTTALLNSERFWQKKVAIKSSYFGSYEVLYVSYPGLPPSPPIPPSSISMIDGGPYSNNGNNGRMIKPLGVDIQKRQHKGGLSRGIIAIIALSVLLAVVLLLAAVLALFKYRHHVSQPTSTPRVSPRSIAKTQGTTESLAAGGLASASSSFRSSIAAYKGSAKTFSANDIEKATDNFNDSRILGEGGFGRVYSGIFEDGTKAAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDRENSPLDWSARIKIALGAARGLAYLHEDSSPPVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTNKEGLEAIIDPSLGTDVPWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDEAKEAGTRNPSQEDLSVDLDNVSSQLPDHFQRLFSAANYASGSDIEKGLSSLEMFSSSARFRRQDSGSFRRHSYSGPLRTGRSQRLWQVIGRLSGSVSEHRTISKL | 1513 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 87 | 129 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 706 | 735 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 50 | 387 | - | - | |
Stsc272351g00003 | 1513 | Pfam | Protein tyrosine and serine/threonine kinase | 1130 | 1399 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc272351g00003 | 1513 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 1099 | 1201 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 407 | 424 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 226 | 240 | - | - | |
Stsc272351g00003 | 1513 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1248 | 1260 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc272351g00003 | 1513 | PRINTS | Proline rich extensin signature | 280 | 305 | - | - | |
Stsc272351g00003 | 1513 | PRINTS | Proline rich extensin signature | 105 | 121 | - | - | |
Stsc272351g00003 | 1513 | PRINTS | Proline rich extensin signature | 142 | 154 | - | - | |
Stsc272351g00003 | 1513 | PRINTS | Proline rich extensin signature | 159 | 180 | - | - | |
Stsc272351g00003 | 1513 | PRINTS | Proline rich extensin signature | 87 | 99 | - | - | |
Stsc272351g00003 | 1513 | PRINTS | Proline rich extensin signature | 214 | 231 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 750 | 811 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 824 | 857 | - | - | |
Stsc272351g00003 | 1513 | ProSiteProfiles | Protein kinase domain profile. | 1126 | 1402 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272351g00003 | 1513 | SUPERFAMILY | Protein kinase-like (PK-like) | 1107 | 1400 | IPR011009 | - | |
Stsc272351g00003 | 1513 | PANTHER | OS01G0750732 PROTEIN | 854 | 1427 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 771 | 811 | - | - | |
Stsc272351g00003 | 1513 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1132 | 1154 | IPR017441 | GO:0005524 | |
Stsc272351g00003 | 1513 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1202 | 1424 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 702 | 735 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 480 | 517 | - | - | |
Stsc272351g00003 | 1513 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 1202 | 1417 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 308 | 355 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 407 | 432 | - | - | |
Stsc272351g00003 | 1513 | MobiDBLite | consensus disorder prediction | 146 | 181 | - | - | |
Stsc272351g00003 | 1513 | Gene3D | Phosphorylase Kinase; domain 1 | 1098 | 1201 | - | - | |
Stsc272351g00003 | 1513 | CDD | STKc_IRAK | 1132 | 1400 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272351g00003 | Stsc-Chr272351 | 26978 | 36065 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272351g00003 | 434 | 1509 | Receptor kinase-like Gene Family | AT5G56890 | 49.468 | 0.0 | 832 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Stsc272351g00003 | PK_Tyr_Ser-Thr | 3.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272351g00003 | - | - | psat:127136544 | 1396.72 |