Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272345g00004 ATGGCTTCAGGGAGAAATAGTTTAAGTAAGAATTCTCAGATAATGCAAAGTATGATCAAAAGCAAGAAGCACGTTATTGCAAGATCTAATTCGCTGTTACTGAAGGATTACCTGATGAGGGACGACCTGAGCTCCTGCTCATCCAACGGTTTCAAATCGTTCCCGCGCCGACCATGCTGCAGCACCGCCGTTGGATTCCTTGTGGCGGAGAAAGATCTCAAAAGCTGTAACAGCAGGAGGAGGAGGAGGTCCAGGAGGAACACCACTACTACTACCACACTCCTCTTAGCTCCTCGTTCTTCTTCGGTTCTGCAGAGAGCTTCGGAAGCTGTAATCAGGGCCATCAAGTCACTGCCACATAAGAGTAGTGGCAGATCCAAGAAAGACGGTTCTGGTAGCGTTTTTTCTAGAAGCTTCTCGAGGAAGCTGCTGAGTAGAAGCTTCTGGAGGAAAGCGGAAGCAAAGGAAGAGGAAGGAGAAGGAAGCACGCAGAGATGGATAAGGACTTCATTCCGCGAGTTGCTTATGCAGGATAGCCACAAAACGGCGTCGTTGAATCAGGATAGCGCGTTCACTACAAATGCCGCAACCTCCTCCTCCTCCTCTTGGGGAGAGAGTGAGTTCACATTTTCGTCTTCAAGTGCTGCTGCTTCTTCTTGTTCTATGGGTTCCGCCGAAAACGACGTCGTTCAGGTCACAAAAGACCCGCTTCCGCCCACTGGCAAGATACAACAAGAGAGAACAAGGGATTGGCCAAATGAGGAGAAAGAACAATTAAGTCCTGTATCAGTACTGGATTGCCCCTTTGAAGATGATAATGAAGGAATTGAACAGAAGCGCATGCAGCAGAAGAGACGGCACTTTAAAGCCATGGCTTCAGTGAAGCCTATGTCCTTGGAGAAATTGATGTCAATGTCAAAATTGAATGATGATGATGATAATAATGAGCATTATTGTTCAGGCATTGTTATTGGAAAACACAACAACAATGATAATGATGGTTTATTATCATCAAAGGAGCTTGAGATTTGCAAGGTGGCTGAGGATTGGGTTGTTGGGAATCCTCAAGAGTTATATTTGGGTTGGGAAGTGAAGAAAGGAAGAGAATTGTACATTAGGGAGATGGAAAAATGTTTGGAGTGGAGAAACTATAATGATACTCAACAAGTGCAGCATTTGGCCATTGAGCTTGAAACTGAGGTCTTCACTGCTTTGATTAATGAGCTTCTACTTGATCTGTGGATTTGCTAG 1251 0.4516 MASGRNSLSKNSQIMQSMIKSKKHVIARSNSLLLKDYLMRDDLSSCSSNGFKSFPRRPCCSTAVGFLVAEKDLKSCNSRRRRRSRRNTTTTTTLLLAPRSSSVLQRASEAVIRAIKSLPHKSSGRSKKDGSGSVFSRSFSRKLLSRSFWRKAEAKEEEGEGSTQRWIRTSFRELLMQDSHKTASLNQDSAFTTNAATSSSSSWGESEFTFSSSSAAASSCSMGSAENDVVQVTKDPLPPTGKIQQERTRDWPNEEKEQLSPVSVLDCPFEDDNEGIEQKRMQQKRRHFKAMASVKPMSLEKLMSMSKLNDDDDNNEHYCSGIVIGKHNNNDNDGLLSSKELEICKVAEDWVVGNPQELYLGWEVKKGRELYIREMEKCLEWRNYNDTQQVQHLAIELETEVFTALINELLLDLWIC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272345g00004 416 PANTHER OS04G0572500 PROTEIN 23 413 - -
Stsc272345g00004 416 MobiDBLite consensus disorder prediction 232 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272345g00004 Stsc-Chr272345 36394 40285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272345g00004 15 413 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 31.697 4.54e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272345g00004 - - ahf:112803960 498.049