Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272334g00004 ATGCACATTAAAAGAAGGGAAAAGAGAAGTAATCATATTGTCGCTTTGAAAGTACTCTTTAAGAGCCAGCTGCAACAGTCTCAAGTTGAGCATCAGCTTCGGCGAGAAGTCGAGATTCAGAGTCATCTCCGACACCCTCATATCTTACGGCTGTATGGGTACTTCTATGATCAGAAAAGAGTTTACTTGATTTTAGAGTATGCACCCAAAGGTGAACTATACAAGGAACTGCAGAAATGCAAATACTTCAGTGAAAGACGTGCAGCTACTTATGTTGCATCATTGGCCCGAGCCCTGATATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCAGAGAACCTTCTCATGGGAGCACAGGGTGAACTGAAGATAGCAGACTTTGGGTGGTCAGTGCACACCTTCAACCGAAGGCGAACCATGTGTGGCACGCTGGATTACCTTCCTCCTGAGATGGTGGAGAGTATTGAACATGATGCAAGCGTGGATATATGGAGCCTTGGTGTCCTATGCTATGAGTTTCTTTATGGAGTCCCCCCTTTTGAGGCTAAAGAACATTCTGATACTTATAGGAGGATTGTACAAGTGGATCTCAAGTTCCCCCCAAAACCCATTGTGTCTTCTGCTGCAAAGGACCTCATCAGTCAGATGCTGGTCAAGGACTCTTCTCAACGTCTACCTTTGCACAAACTTCTTGAACACCCTTGGATTGTTCAGAATGCGGATCCCTCTGGTGTATATAGGGGCTAA 756 0.4458 MHIKRREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLMGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESIEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNADPSGVYRG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272334g00004 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Stsc272334g00004 251 SUPERFAMILY Protein kinase-like (PK-like) 6 244 IPR011009 -
Stsc272334g00004 251 FunFam Aurora kinase A 2 71 - -
Stsc272334g00004 251 PIRSF ILK 4 236 - -
Stsc272334g00004 251 Pfam Protein kinase domain 6 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272334g00004 251 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 250 IPR030616 GO:0004672
Stsc272334g00004 251 FunFam serine/threonine-protein kinase Aurora-1 72 247 - -
Stsc272334g00004 251 CDD STKc_Aurora 6 240 - -
Stsc272334g00004 251 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272334g00004 251 SMART serkin_6 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272334g00004 251 Gene3D Transferase(Phosphotransferase) domain 1 3 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272334g00004 Stsc-Chr272334 15717 17835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272334g00004 6 250 CBL-interacting serine-threonine protein kinases AT5G10930 34.921 1.86e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Stsc272334g00004 Pkinase 7.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272334g00004 K08850 - cit:102618612 496.123