Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272333g00009 ATGGTTCTTCTGAAATCATCTTCATCGTCATCATCTCTAGTATTTAAAGTGAGGAGGAACGAACCAGAGCTTGTGGCACCTGCTAGACCCACTCCCCATGAACGTAAGCTTCTATCTAATCTTGATGACCAAAAGGCTCTTCGTTTCCACCTTACAGTGGTGCAATTCTTTCCTAACAACCCTTTAATAACGCCATGGGATGACTTCATCCATTTCTTTAAGGAAGCATTGTCAAAAGCACTTGTGTTTTATTATCCATTTGCTGGGAGAATCAGGGAAGATACTAAGGGAAAACTTATGGTGGATTGCACTGGTGAAGGTGTATTGTTCATCCAAGCAGAAGCAGATGTCACACTTGACCTGTTTGGAAGTGATCTTCTGCCTCCATTCCCTTGCTTTGATGATGAGCTTCTTTACAATGTTCCCGGTTCTGATGAAATTATTAACACTCCTATCCTAACTATTCAGATCGTTTATTCATTACATTATGAAACCCAAACAGGAGCAACATCAAGGTGGATTATTATGGACACAAGTGATCTCCCTTCCACATTGCCGTTATGGATTTACTTATTATTTAGTACCCATAACCATAAGTCATAA 603 0.3997 MVLLKSSSSSSSLVFKVRRNEPELVAPARPTPHERKLLSNLDDQKALRFHLTVVQFFPNNPLITPWDDFIHFFKEALSKALVFYYPFAGRIREDTKGKLMVDCTGEGVLFIQAEADVTLDLFGSDLLPPFPCFDDELLYNVPGSDEIINTPILTIQIVYSLHYETQTGATSRWIIMDTSDLPSTLPLWIYLLFSTHNHKS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272333g00009 200 Gene3D - 15 163 IPR023213 -
Stsc272333g00009 200 Pfam Transferase family 16 157 - -
Stsc272333g00009 200 PANTHER ACYL TRANSFERASE 4 15 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272333g00009 Stsc-Chr272333 38573 39277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272333g00009 15 159 Monolignol Biosynthesis Gene Families AT5G48930 35.172 4.53e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272333g00009 K19861 - tcc:18599665 192.2