Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272333g00007 ATGAATCACACCATCTGTGATGTGAATGGATTTGAGCAGTTCACAAAGGCGATAATAGAAATAGCTTATGGCGCAGAAAAACCTTCCATCATGCCAGTGTGGCGTAGGGAGCTTCTTTGTGAGACAAACCCACCAAGAGTTAGATGCATTCACCATGAATATGACCAACTACCACTTGACAACAAAAGCCTCTTCAAACCCTACCACTCTTCCTTCTTCTTTGGCCCCAAAGAGATTCATGCATTGCGCTGCTGTCTCCCCGGCCACCTTGCTGAATCTTCGACCACCTTTGACGTCCTCACAGCATGCTTGTGGCGCTGTCGTACAGCTGCACTGCAATGGCAAAACCCTAATCAAGAGGTTCGCCTATTATCCATTGTGAATGCACGTCGAAACTCCAGATTCAACCCTCCACTGCCAAAAGGGTTTTATGGCAACGCTATTGTGTTTCCTGCGGCGGTTTCCACGGTGGGAAAGATCTGCGGAAGCCCCTTGAGCTATGTACTGGAGTTGGTGAAGAAGGCAAAGAGTGAAGTAAGTGAAGAGTATTTTCACTCTGTTGTTGACCTATTGGCCATTAATGGAAGGGCTTGCTTTACTAGAACAGGATCGTTTGTGGTGTCAGATCTTTCAAGAACTGGATTTAGAGATGCGAATTATGGATGGGGCAAGCCTTTGTATTCTGGATTAGCCAAAGCTGGTTTTGGAGACATTCTTGGTGTGAGTTTCTATGTTCCCCATACCAACTCTAAAGGAGAGCATGGTACTGTTGTTCCAATATGTCTGCCTGAAGAAGCCATGGTCAGATTTGAAGAAGAGCTTAATGAAATACTCAATTTCGAGGATGGAAAAGAAGAATCCGTAACTATTTTAAGATCCAACATCTAG 888 0.4493 MNHTICDVNGFEQFTKAIIEIAYGAEKPSIMPVWRRELLCETNPPRVRCIHHEYDQLPLDNKSLFKPYHSSFFFGPKEIHALRCCLPGHLAESSTTFDVLTACLWRCRTAALQWQNPNQEVRLLSIVNARRNSRFNPPLPKGFYGNAIVFPAAVSTVGKICGSPLSYVLELVKKAKSEVSEEYFHSVVDLLAINGRACFTRTGSFVVSDLSRTGFRDANYGWGKPLYSGLAKAGFGDILGVSFYVPHTNSKGEHGTVVPICLPEEAMVRFEEELNEILNFEDGKEESVTILRSNI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272333g00007 295 Gene3D - 68 281 IPR023213 -
Stsc272333g00007 295 Gene3D - 1 56 IPR023213 -
Stsc272333g00007 295 PANTHER ACYL TRANSFERASE 4 1 277 - -
Stsc272333g00007 295 Pfam Transferase family 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272333g00007 Stsc-Chr272333 27176 29100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272333g00007 1 277 Monolignol Biosynthesis Gene Families AT5G48930 25.256 1.96e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272333g00007 K19861 K13610 gmx:100795237 395.971