Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272333g00006 ATGGTTCTCCTGAAATCATCATCATCATCATCTTTAGTGTTTAAAGTAAGGAGGAACCAACCTGAGCTAGTGGCACCTGCTAGCCCCACTCCCCATGAACTTTTGCTTCTATCTAACATTGATGAACAAGAGGGTCTTCGTTGTCACCTTCCATTGGTGCAATTCTTTCCTTACAACCCTTTAATAACGGCATGGGATGACTTCATCCATTTCATCAAGGAAGTATTGTCAAAAGCACTTGTGTGTTATTATCCATTTGCTGGGAGAATCAGGGAAGGTACTAAGGGCAAACTTATGGTGGATTGCACTGGTGAAGGTGTATTGTTCATCCAGGCAGAAGCCGATGTCACACTTGAGCAGTTTGGGAGTGATCTTCTGCCTCCATTCCCTTGCTTTGATGAGCTTCTTTACAATGTTCCTGGTTCTGATGAAATTATTAACGCTCCTATCCTAACTATTCAGGTTCAATTTCTAGCTAGATTGCCAATAATATTCATTTGTATATATATATATTACGGATATCCTAATTATAGGGCACGGGTTGTTTTGGTGCATGGGAATGGTGGTGGTGGTGGTAGGGCAGGGGTTGTTTTGGGAGCTGGGAATGTTGATGGTGGTGGTGATGGGGCATTGGGTGGAGATAAAATTGTGACTGAGGATGGAGGAGGTGGAGGGAATGGAGGTGAGGTTGAAATTTGTTGA 702 0.4316 MVLLKSSSSSSLVFKVRRNQPELVAPASPTPHELLLLSNIDEQEGLRCHLPLVQFFPYNPLITAWDDFIHFIKEVLSKALVCYYPFAGRIREGTKGKLMVDCTGEGVLFIQAEADVTLEQFGSDLLPPFPCFDELLYNVPGSDEIINAPILTIQVQFLARLPIIFICIYIYYGYPNYRARVVLVHGNGGGGGRAGVVLGAGNVDGGGDGALGGDKIVTEDGGGGGNGGEVEIC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272333g00006 233 PANTHER ACYL TRANSFERASE 4 14 137 - -
Stsc272333g00006 233 Gene3D - 14 170 IPR023213 -
Stsc272333g00006 233 Pfam Transferase family 15 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272333g00006 Stsc-Chr272333 25547 26248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272333g00006 14 158 Monolignol Biosynthesis Gene Families AT5G48930 36.735 4.18e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272333g00006 K19861 - gmx:100795237 205.682