Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272333g00003 ATGTCTTCTCCAAACCCTGCCAAGCTTCCTTCTTCTTTGGCCCCAAACAGATCGATGCATTGCGCCGCCTCCTCCCTGGTGACCTTGCTCAATCTTCCTCATCCTTTGATGTCCTCACTGCATTTCTCTGGCGTTGCCATACAGCTGCTTCGCATTGTCAAAATCCTAATCAAGAGATCTACGTTTAATCGATCTACGTTTAATCGTCCACTACCTGAAGGGTATTATGGAAACGCTTTTGTGACTCCTGCGGTAGTTTCCACTGTGGAAATGCTATGCGATCGGCCCTTGAGCTACGCCTTGGAGTTGACTAAGAAATCAAAGAAAGCAGCTATTGAGGAGTATGTGCACTCTGCTGCCGATCTAATGGCCACGAATGAAAGGGGTGCCTCTTCGTTGAATAGAACATTGTTTATAGTTTCAGACCTGACAAAATGTGGGTTAAGTGATGTGGATTATGAATGGGGTAAGCCTTTGTATTTCGGACTAGATGGTATATATGATATTCCTGGTTCATGCTACTATTTTCCGCATACTAACTCTAAAGGAGAGAATGGTAAAGTGGTCTTAGTTTACCTCCTAAAAGAAGACATGAAAAGGTTTGAGAAAGAGCTTAAATACTTCACATCAACGTTTGAAGATGAACCTATCAAGTTAACTGTTCAATCTGTATGTAGTAGATACTTGATCTAA 693 0.4228 MSSPNPAKLPSSLAPNRSMHCAASSLVTLLNLPHPLMSSLHFSGVAIQLLRIVKILIKRSTFNRSTFNRPLPEGYYGNAFVTPAVVSTVEMLCDRPLSYALELTKKSKKAAIEEYVHSAADLMATNERGASSLNRTLFIVSDLTKCGLSDVDYEWGKPLYFGLDGIYDIPGSCYYFPHTNSKGENGKVVLVYLLKEDMKRFEKELKYFTSTFEDEPIKLTVQSVCSRYLI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272333g00003 230 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 64 206 - -
Stsc272333g00003 230 Gene3D - 59 205 IPR023213 -
Stsc272333g00003 230 Pfam Transferase family 64 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272333g00003 Stsc-Chr272333 5349 6258 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272333g00003 60 205 Monolignol Biosynthesis Gene Families AT5G48930 27.451 6.05e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272333g00003 K19861 - gmx:100795237 150.984