Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272333g00002 ATGATTCTCCAGAAATCATCTTCATCAACATCTCTGGTGTTTAAAGTGAGGAGGAATCCAGCAGAGCTAGTGGCACCTGCTGACCCCACTCCCCATGAGCTTAAGCTTCTCTCCGACATTGATGACCAACAAAGTCTACGCATCTACTATTCATCGGTTCAGTTATTTCCTTACAGCCCTTCAATGGCAGGGAAAGACCCTGTTCATGTCATCAGGGAAGCATTGTCCAAAGCATTTGTGTTGTATTATCCATTAGCTGGAAGGCTTAGGGAAGGTCCTAGTGGCAAACTTATGGTGGATTGCACTGGTGAAGGTGTATTGTTCATCGAAGCTGATGCAGATGTTACTTGA 351 0.4501 MILQKSSSSTSLVFKVRRNPAELVAPADPTPHELKLLSDIDDQQSLRIYYSSVQLFPYSPSMAGKDPVHVIREALSKAFVLYYPLAGRLREGPSGKLMVDCTGEGVLFIEADADVT 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272333g00002 116 Pfam Transferase family 15 115 - -
Stsc272333g00002 116 PANTHER ACYL TRANSFERASE 4 14 115 - -
Stsc272333g00002 116 Gene3D - 14 116 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272333g00002 Stsc-Chr272333 4625 4975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272333g00002 15 113 Monolignol Biosynthesis Gene Families AT5G48930 38.235 1.64e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272333g00002 K19861 - aip:107641488 189.889