Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272333g00001 GTGACACATCTGAAATGTGGCGGGTTTATCTTTACCATAAGTGTGAGCCATTTAATGTGTGATGCAATCGGAATTGCCGACTTCATAAAGGCGGTTGCAGAAATAGCCCAAGGTGCATCAAAACCTTCTTTCACACCAGTATGGTGTAGGGACCTTCTTTGTGCCAGAGACCCACCAACAGTTACAAGCCTCCACCCTGAATACCACCAACTACCGCTTCCTGACTACAAAAGTCCCTCCTTCAAATGCTGCAACGCTTCTTTCTTCTTTGGCCCCAAACAGATCCATGCATTGCGCCGCCTCCTCCCTGGTGATATCGCTCAATCTTCCTCCACCTTTGATATCCTCACTGCATTCTTATGGCGTTGTCATACCGCTGCACTCTATTGGCAAAACCCTAATCAAGAGATCAGATCTACGTTTAATCGTCCACTACCTGAAGGCTTTTATGGCAACGCTTTTGTGATTCCTGCCGTGGTTTCCACCGTGGGGATGCTATGCGATCGGTCCTTGAGCTACGCATTGGAGTTGGCTAAGAAATCAAAGAAAGATGCTACCGAGGAGTATTTCCGCTCTAATGCCGATCTAATGGGAAGGCCTGCCTATTCCTTAGCAGGATCGTTTATAGTTTCAGACCTTACAAAATCAGGGTTAAGTGATGTGGATTTCGGATGGGGTAAGCCTTTGTATTACGGACTAGACACGGCTGTTACCGGTGAGAGCTACTATGTTCCATATACTAACTCTAAAGGAGAGCATGGTAAACTGGTCTTGATTTGCCTCCCAGATGAAGCCATGAAAAGGTTTGAGAAAGAGCTTAATGAAATACTTCACATCAACGATGAAGAAATTCATATCAAGTAA 864 0.4537 VTHLKCGGFIFTISVSHLMCDAIGIADFIKAVAEIAQGASKPSFTPVWCRDLLCARDPPTVTSLHPEYHQLPLPDYKSPSFKCCNASFFFGPKQIHALRRLLPGDIAQSSSTFDILTAFLWRCHTAALYWQNPNQEIRSTFNRPLPEGFYGNAFVIPAVVSTVGMLCDRSLSYALELAKKSKKDATEEYFRSNADLMGRPAYSLAGSFIVSDLTKSGLSDVDFGWGKPLYYGLDTAVTGESYYVPYTNSKGEHGKLVLICLPDEAMKRFEKELNEILHINDEEIHIK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272333g00001 287 Gene3D - 1 70 IPR023213 -
Stsc272333g00001 287 Pfam Transferase family 1 274 - -
Stsc272333g00001 287 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 273 - -
Stsc272333g00001 287 Gene3D - 81 280 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272333g00001 Stsc-Chr272333 2342 3336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272333g00001 1 276 Monolignol Biosynthesis Gene Families AT5G48930 28.239 4.92e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272333g00001 K19861 - gmx:100795237 333.569