Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272322g00001 ATGCCTTCAGTGTGTCCTTCACTTATCTTGTTCGCAGCAAGACTTTCAGGGCTTGCAGTTGCACTCCTTGTCCTTTTTTGGGCCCTTGCCTTCAAATCCACCTTTCTCCCTTCTTCTCTTTCCCAGCAAGACTTCATTTATGCAGTACTTCATCCTTTGCTGATGGTCATTGGCTTTATTCTCTTAAGTGGAGAAGCAATTTTGGTGCACAGATGGTTGCCTGGGTCTATGGGATTGAAAAAATCAGTGCATTTAGTGCTTCAAGGTGTGGCTCTAGCTTCTGGAATATTTGGAATTTGGACTAAATTTCAGGTAGAGGATGGGATTGTGGCCAAATTCTATAGCCTTCATTCATGGATGGGTTTGATTTGCATTTCCATCTTTGGAACTCAGTGGTTGTTAGGCTTCTTGAACTTTTGGCACAGAAGAGAAGCAAGGATGGCAAGGATAAAGATTTTACCTTGGCATGTATTCTTGGGCCTATACACTTATGCCTTGGCAGTAGCAACAGCGGAAACTGGGCTTCTAGAGAAATTAACATTCATACAAACAAAGAGAAATAATGTATCCAATCACAGTGCGGAGTCCATGGTGGTTAATAGTTTAGGATTGGTTCTAGCCATGCTAAGTGGGTTTGTTATTCTGGCTGCTGTTTCACCTAGGTATGGGTATCATACTCTTCAGAGCCGAATCTTGTACTCGGATACTAGGTGTTTGTCTTCTTAA 726 0.4229 MPSVCPSLILFAARLSGLAVALLVLFWALAFKSTFLPSSLSQQDFIYAVLHPLLMVIGFILLSGEAILVHRWLPGSMGLKKSVHLVLQGVALASGIFGIWTKFQVEDGIVAKFYSLHSWMGLICISIFGTQWLLGFLNFWHRREARMARIKILPWHVFLGLYTYALAVATAETGLLEKLTFIQTKRNNVSNHSAESMVVNSLGLVLAMLSGFVILAAVSPRYGYHTLQSRILYSDTRCLSS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272322g00001 241 PANTHER CYTOCHROME B561-RELATED 5 220 IPR043205 GO:0016491
Stsc272322g00001 241 FunFam Cytochrome b reductase 1 3 226 - -
Stsc272322g00001 241 Pfam Eukaryotic cytochrome b561 50 181 IPR006593 -
Stsc272322g00001 241 ProSiteProfiles Cytochrome b561 domain profile. 12 218 IPR006593 -
Stsc272322g00001 241 SMART 561_7 50 175 IPR006593 -
Stsc272322g00001 241 Gene3D - 2 227 - -
Stsc272322g00001 241 CDD Cyt_b561_ACYB-1_like 50 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272322g00001 Stsc-Chr272322 16072 22297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272322g00001 1 241 Chloroplast and Mitochondria Gene Families AT1G26100 61.134 4.01e-92 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272322g00001 K08360 - gmx:100527512 367.081