LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc272305g00004	ATGAAGTGGATTCAACTAGCACTCAACACCAACAGCACCAGCAGCGAGAGGCGTAGAAGAAGGAGCAAGGTTCAGACGGTAGAAGGTAAAAGGCTTCAGGCAGATGGCAGAAAAGGTCTTCAGCAGGCAGAGAAAGAATGGGCAGGTGCAGCGGAGTGCGAGGGGTACGAGGCAGCAGCGGCACAGATTAGCACCGAAGACAGTGACGACGGCGGCATCAACACCAAACAGATTTTGTTTTCGTTTTCACAAGAATGTAACAATATTGAAGTGGAACCACCATATGATGATTCTATGAATCCATCTTCTGAACCATGCCCTCTGAATTTTGTTATTAAAGAGGTGCCAGATCATAATCACATATCAGATGATGAAATCCCTAGAGCAGGCATGTGTTTTGATTCTTTGGAGGAAGCTCACGATTTTTACAAGAATTATGCGGAGAAAGTGGGATTTGTTATGAAGATTAGGAATACAAATCATGTTAAGAATGATAAGGGTGAGAAGATACCGATTAATCTGTCAATTCATTGTAACCAACAGGGTAATCGCATGTCACGAGCGAAGGCACTAAGAGGATCTAAGAAGATCACGGCTGCAATGTGCAATGCAAGGGTGTATGTGAAGTTTAACAAAGACAATAGTAAATGGTTTTACTCGATAGTTGAAGGAAAGCATTCGCATCATTATTCTCCTAAGAAGTCCTGTAAGACCCCATCTTTGTGCTTTTTCGTTTCTAGCAGAAACGTATGA	753	0.4263	MKWIQLALNTNSTSSERRRRRSKVQTVEGKRLQADGRKGLQQAEKEWAGAAECEGYEAAAAQISTEDSDDGGINTKQILFSFSQECNNIEVEPPYDDSMNPSSEPCPLNFVIKEVPDHNHISDDEIPRAGMCFDSLEEAHDFYKNYAEKVGFVMKIRNTNHVKNDKGEKIPINLSIHCNQQGNRMSRAKALRGSKKITAAMCNARVYVKFNKDNSKWFYSIVEGKHSHHYSPKKSCKTPSLCFFVSSRNV	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc272305g00004	250	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	65	238	-	-
	Stsc272305g00004	250	MobiDBLite	consensus disorder prediction	8	30	-	-
	Stsc272305g00004	250	MobiDBLite	consensus disorder prediction	14	30	-	-
	Stsc272305g00004	250	Pfam	FAR1 DNA-binding domain	141	230	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc272305g00004	Stsc-Chr272305	31041	33120	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Stsc272305g00004		FAR1	2.6e-11	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc272305g00004	-		K17604	adu:107476090	123.635