Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272304g00003 ATGGAACTGGAGAAGCGGTGCGCTTCAAGCTCTTTCTCTTCTTCGCCTTCCTCCTCGTCTTCGTCTGCGTCGGAGGACCACCGTGCGGATCGCCTCGTCAAGACGGAGATTGAAGCCGCCGAGACTCTCGCTGACTTGGCGCACCTCGCCATGCGCGAGACCACCGCCTCTCGCTCCGCCGACGCGCCACGATTCACGCGCCACTCTCACTCGGATCTCTCTCTCTCAGTCTCTGCCCCTCTCCCCGGGGGAGAAGCTATTGCAGGCCAGCAGCTAGATGAAAAACCGGTTGCTTGTAATTCTGGAGAAACAGAAAGGAGGCAGGATGACTGCTTAAGACATGTGAAGGGGGAACAGCAGGATGCTGATCCACTGAAGACTACAAGCTACGCTGGCGTTCGCTGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGCACGGAGAATTCGCAGAATATTGGCGAACAGAGAGTCAGCTAGGCAGACAATCCGTCGTAGACAGGCTTTGTGCGAAGAGTTAACCAGAAAAGCTTCCAATTTAGTGCTGGAGAACGAAAACCTGAAGAAGGAGAAGGATATGGCTCTGAAGGAGTATCAGTCTTTGGAGACTACAAATAAGCATTTAAAGGCACAGATAGCCAAGTCAATAAACAATGAGGTAGACAAAACTCCTGTTGAACAGGAATCATCTGTGGCTGAGGTAACAAATTTATCTGGTAGTGCCCCATGGTTCGTTTATAACCATTTTCCAGTCACACAATTATTTTGGCCCCCCATCATTCAGTCTTCTAATCCAGTTCAAGTACAACATCCACCATTTGGTTCCATTCCCACTCCGTCTACTGTTTCTATGCCATGCTCTTCCGAGACTGACTCATTTCACAAGCAAAACAACCTTGTAAATGACAATAGGACACAAAATCCATTATACATGTTACCATGTCCCTGGTTGTTTCCTCTTCCAGAGTTTGAAAATGGACAACCAGCACCACCTTCCATTGGCCTAATTGATAAACGAGATGAACTTTCCCTAGGTAAACATTGTAGTCCTTCTTTGTCTTTGAATACAGTGGCAACTATGGATTATCAACCAGCTCTACCAATAAAGCCTAAAACTGAAGCTTCTGGCTGGACAGAGGCCAGATCAACTCATGATGCTGGCAACACCATTATAACATTTCCATTGGATGGAGCTGAGCATAAAACAGGAAGTCACATTATAGGGAACCACCATGGACCTTCACTTGATTGTAATGGGAATGTGTCTGATGTCAAGCAGGAGCAAGAGCAAGAGCATGACCTCGAGCTTCAACTACATTCTGTTCCCAAGTTATCTTTGTCTTCAACAGCATCTCATACTGCAACTTCTCCACAGGAAAAGAAACAAACAAAGTCCTTATGCTCAGGTAAAAGTTTAGCGGATGCAATTGCTGCGACAGAGGCTAGAAAGAGGAGAAAAGAACTAACTAGGTTAAAGAGCGTCCATAACCGACAGTACCGGATGCATTGTTGA 1521 0.4661 MELEKRCASSSFSSSPSSSSSSASEDHRADRLVKTEIEAAETLADLAHLAMRETTASRSADAPRFTRHSHSDLSLSVSAPLPGGEAIAGQQLDEKPVACNSGETERRQDDCLRHVKGEQQDADPLKTTSYAGVRCSKSRRNLTEEEKEARRIRRILANRESARQTIRRRQALCEELTRKASNLVLENENLKKEKDMALKEYQSLETTNKHLKAQIAKSINNEVDKTPVEQESSVAEVTNLSGSAPWFVYNHFPVTQLFWPPIIQSSNPVQVQHPPFGSIPTPSTVSMPCSSETDSFHKQNNLVNDNRTQNPLYMLPCPWLFPLPEFENGQPAPPSIGLIDKRDELSLGKHCSPSLSLNTVATMDYQPALPIKPKTEASGWTEARSTHDAGNTIITFPLDGAEHKTGSHIIGNHHGPSLDCNGNVSDVKQEQEQEHDLELQLHSVPKLSLSSTASHTATSPQEKKQTKSLCSGKSLADAIAATEARKRRKELTRLKSVHNRQYRMHC 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272304g00003 506 MobiDBLite consensus disorder prediction 449 470 - -
Stsc272304g00003 506 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 280 IPR044827 GO:0003700|GO:0006355|GO:0043565
Stsc272304g00003 506 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 148 211 IPR004827 GO:0003700|GO:0006355
Stsc272304g00003 506 MobiDBLite consensus disorder prediction 7 23 - -
Stsc272304g00003 506 Pfam bZIP transcription factor 146 208 IPR004827 GO:0003700|GO:0006355
Stsc272304g00003 506 CDD bZIP_plant_GBF1 151 202 IPR045314 GO:0003700|GO:0006355
Stsc272304g00003 506 SMART brlzneu 146 210 IPR004827 GO:0003700|GO:0006355
Stsc272304g00003 506 Coils Coil 159 221 - -
Stsc272304g00003 506 SUPERFAMILY Leucine zipper domain 150 205 IPR046347 GO:0003700|GO:0006355
Stsc272304g00003 506 MobiDBLite consensus disorder prediction 54 74 - -
Stsc272304g00003 506 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272304g00003 Stsc-Chr272304 18179 22334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272304g00003 135 506 bZIP Transcription Factor Family AT1G19490 38.667 8.34e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc272304g00003 bZIP_1 3.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272304g00003 - - ahf:112754487 785.408