Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272304g00002 ATGGGAGAATTACCGGAGACAACAAGCTATGCCGTGGAAGATCACCACCATAATCTATTGACAACAGCAATGGGAAACAAGAAGTTAGCGAGAGAGTCGAAAATACATAGCTACGGAAAGAGTTTCAACGGATTCGTTGCACGACTTTTGCCACATGAAGCAAAGAAACTGCAAGAGGAGGAGAATGTGGTATCAGTATTTCCAAACAAAAGGCTCAAACTACACACGACAAGGTCTTGGGATTTCTTAGGAATGCACCAGAAAGTGAAGAGACGCACAAACGTAGAGAGCCACATCGTTGTGGGTGTGCTAGACACAGGAATATGGGTTGATTGCCCGAGTTTCAACGATGAAGGGTTTGGACCTCCGCCACGACGATGGAAGGGAAAATGTGTTACGGGACCCAACTTCACTTCTTGCAACAACAAGGTGATCGGAGCAAAATACTTCAACCTCGACCAAGTCTACCAAATACCGGACAACATCAGCCCCGCCGACGACCAGGGCCACGGCACTCACACTGCCTCCACGGCAGCCGGCGTGGCCGTGAAGGACGCAAGCCTCTACGGCATTGGCAAAGGCACTGCACGTGGTGGCGTCCCATCTGCCCGTGTTGCCATGTACAAGGTTTGCTGGAGCATTGGGTGCAGCGACATGGACATGCTTGCCGGCTTCGATGACGCCATCGCCGACGGCGTCAATTTCATTTCGGTTTCAATTGGAGGGCCTTCTAGGGACTTCTTCAATGACCCTATTGCCATCGGTGCGTTCCATGCTATGAAGAGAGGGATCCTCACTTCTTGCTCTGCCGGCAATGACGGTCCTCACCTTTCCACCGTTGAGAATGTTGCTCCTTGGATACTTACTGTGGGTGCTTCCACCGTTGATAGGAAGTTCACGACGGTGGTGGCCTTCGGCAACGGCAAGAACGCCACAGGACTATCTATCAATACCTTTTCCCCTGAAAAGAAGATGTACCCGTTGATTAATGGAGTGCTTGCTGCTAACGAAACTGGAGATGGCTATGGCAATCCGATTTCTTGTGATTATGGGACACTAAGGGAGGACAAGGTGCAGGGGAAGATAGTGTACTGCATAGGAGGCATGGGTGGTCAAGACTTGGTCATCAAACATTTGGGTGGAGCAGGCACTATCATAGGCCTTGACGACAGAATAGATGACTCCTTCAACGTAGTTGTTCCAGCTGCTTATGTTGAAGCCAATACTGATGGCAAAGACATTGATCAATACATCAATTCCACTAAGGATGCTACAGCAGTGATACACAAGACAACAAGTATAAAGACATCTGCTCCATTTGTTGCTACTTTCTCATCAAGAGGCCCTCAATTTATCAACCCCAACATCCTCAAGCCTGACTTGGCTGCTCCGGGACAAGACATTCTTGCTGCATATTCCAGATTGAATACAATAACAGGGTACCCTGAAGACACACGTCATGATGTTTATAATATAATATCAGGGACATCAATGGCTTCCCCACATGCCGTTGGAGCTGCTGCATATGTCAAATCCTTCCACCCTGATTGGAGCCCCGCTGCAATTAAATCGGCCCTCATGACCACCGCCACTCCCTTGAAAACAACTGATAATTTCTCGGAGCTGGCGGCTGGGGCAGGACAGATGAACCCACTTACAGCAGTTCATCCCGGCTTAGTTTATGACATTAGAATGGACTCCTATGTCGCCTTCCTATGCAAGGCAGGCTACAATGCCACCAACATTGGTATACTTATAGGCACCAAGAGCTTCAACTGCACAGGCGCCAAGCTTGCGCGAGGCACCGATGGACTCAACTACCCCACCATGCATCTCCAGCTCATGTCTGCTGATGAAAAGATAACCGCAGTCTATCACCGGAGAGTGATGAATGTAGGAGGTGGGACCACAACGTACAAAGCTAAAGTTACAGCACCCGAGGGAGTTTCTGTTGAGGTGATCCCAGATACGTTGGAGTTTAGTAGGTTGCATCAAGAACTGTCGTTCAAAGTTGTCCTGAAGGGGCCACCAATGGCGAAAGTGACACGGGTGTTAACTGGATCAGTTGAATGGCAGGACTCTAAACACAACGTCAGAAGTCCCATACTCTTATACAAACCCATGTTGTAA 2130 0.4897 MGELPETTSYAVEDHHHNLLTTAMGNKKLARESKIHSYGKSFNGFVARLLPHEAKKLQEEENVVSVFPNKRLKLHTTRSWDFLGMHQKVKRRTNVESHIVVGVLDTGIWVDCPSFNDEGFGPPPRRWKGKCVTGPNFTSCNNKVIGAKYFNLDQVYQIPDNISPADDQGHGTHTASTAAGVAVKDASLYGIGKGTARGGVPSARVAMYKVCWSIGCSDMDMLAGFDDAIADGVNFISVSIGGPSRDFFNDPIAIGAFHAMKRGILTSCSAGNDGPHLSTVENVAPWILTVGASTVDRKFTTVVAFGNGKNATGLSINTFSPEKKMYPLINGVLAANETGDGYGNPISCDYGTLREDKVQGKIVYCIGGMGGQDLVIKHLGGAGTIIGLDDRIDDSFNVVVPAAYVEANTDGKDIDQYINSTKDATAVIHKTTSIKTSAPFVATFSSRGPQFINPNILKPDLAAPGQDILAAYSRLNTITGYPEDTRHDVYNIISGTSMASPHAVGAAAYVKSFHPDWSPAAIKSALMTTATPLKTTDNFSELAAGAGQMNPLTAVHPGLVYDIRMDSYVAFLCKAGYNATNIGILIGTKSFNCTGAKLARGTDGLNYPTMHLQLMSADEKITAVYHRRVMNVGGGTTTYKAKVTAPEGVSVEVIPDTLEFSRLHQELSFKVVLKGPPMAKVTRVLTGSVEWQDSKHNVRSPILLYKPML 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272304g00002 709 Pfam Subtilase family 97 547 IPR000209 GO:0006508|GO:0008236
Stsc272304g00002 709 CDD PA_subtilisin_like 302 428 - -
Stsc272304g00002 709 ProSiteProfiles Serine proteases, subtilase domain profile. 79 555 - -
Stsc272304g00002 709 CDD Peptidases_S8_3 72 531 IPR034197 -
Stsc272304g00002 709 ProSitePatterns Serine proteases, subtilase family, serine active site. 495 505 IPR023828 -
Stsc272304g00002 709 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Stsc272304g00002 709 Gene3D Peptidase S8/S53 domain 99 568 IPR036852 GO:0004252|GO:0006508
Stsc272304g00002 709 SUPERFAMILY Subtilisin-like 74 559 IPR036852 GO:0004252|GO:0006508
Stsc272304g00002 709 FunFam Subtilisin-like protease SBT1.5 98 322 - -
Stsc272304g00002 709 Pfam Peptidase inhibitor I9 10 75 IPR010259 -
Stsc272304g00002 709 Gene3D - 296 434 - -
Stsc272304g00002 709 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Stsc272304g00002 709 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Stsc272304g00002 709 PRINTS Subtilisin serine protease family (S8) signature 494 510 IPR015500 -
Stsc272304g00002 709 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 702 IPR045051 -
Stsc272304g00002 709 Gene3D - 572 706 - -
Stsc272304g00002 709 Pfam Fibronectin type-III domain 605 703 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272304g00002 Stsc-Chr272304 13551 17379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272304g00002 1 529 Subtilisin-like Serine Gene Family AT5G03620 61.967 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272304g00002 - - ahf:112805606 1275