Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272304g00001 ATGGCACTTGTCGAAACATCTTCTAATTCTTCCACCGTGCATCATCATCTTTTCCCAAACACTCTCTTTCTTCCACAGATCATGATGATCATAGTCATGGTCATCATGGTGATGGGGATTGTGACCACTAGAATAATGAAAAACAGCTTGTGCAGCTGCGAAACATGCCAGGCCTACCTGACTTCAAGCTGGTCTAAACACTTCAAAAATCTCTGCGACTGGTACGCACACCTTCTCAAACAATCTCCCACAAAAACCATCCACATACACGTTCTTCAAAACACCATAACCGCCAACCCGAAAAACGTTGAGTACATGCTCAAGACCAGGTTCCACAACTTCCCCAAAGGGAAACCCTTCTCCACCATCCTCGGCGACTTTCTCGGCCGCGGAATCTTCAACGTCGACGGCCATCTTTGGTCCTTCCAGAAGAAGATGGCCACCTCCGAGCTCACCAAGACCTCCATAAGATCCTACGCCTTCGACATCGTCAACCACGAAATCCACCACCGCCTCCTCCCTCTCCTCTCTTCAAACCAAGGACAAATCTTGGATTTGCAAGACATCTTTCGGAGATTCTCCTTTGACACCATTTGCAGATTCTCCTTCGGCTTGGACCCCATGTGTCTAGAACTTTCCATGCCGATCTCCGACTTCGCCGTCTCCTTCGACCTGGCATCCAGACTCTCCGCCGAAAGAGCCATGTCCGTGTCCCCTCTCGTCTGGAAGACGAAGCGGTTGCTCAACGTAGGAAGCGAAAAGAAGCTTCGAGAAGCTCTTTGTAATATCAACGTCTTGGCCAAAGAGGTCATAAGACAAAGAAGAAAGATGGGGTTTTGCGGTCAGAAAGATCTCTTGTCCCGCTTCATGAGCACCGTCAACGACGATAAATACCTGAGGGATATAGTCATTAGCTTCCTCCTGGCCGGCCGCGACACGGTGGCCTCGGCCCTGACCAGCTTCTTCTGGCTGCTGGCTAAGCATCCAGAAGTAGAGACGAAGATCAGGGACGAGGCCAAGAACGTGGTCGGAACCGAAATGGAGGTAACGAGATTTGAAGAACTGCAAAAACTGCAGTATTTGGAAGCGGCAACATATGAGAGCATGAGATTATTCCCTCCGATCCAATTGGATTCGAAGTTCTGTGTAGAAGACGATGTGTTACCGGATGGGACATGGGTGAAGGGTGGAACTAGGGTTACTTACCACCCATACGCGATGGGCAGATTGGAAGAGATATGGGGGAAAGATTGCTTGGAATTCAAGCCGGAAAGGTGGTTGAAGGATGGAGTTTTGGTGAGTGAGAATCCGTTTAAGTACCCAGTTTTTCAAGGGGGGATGAGGGTGTGTTTGGGGAAAGAAATGGCTTTGCTTGAGGTGAAAAGCGTGGCACTTTCTTTGCTGAAACGGTTTCATGTACAGTTTGTTGGAGTGGGACCCACAAGTCACGGCACTCCACGATTCTGTCCAGGCCTCACTGCTACTTTTAGTTGCGGCCTTCCTGTTAAGCTTACTCAACGGTGA 1524 0.4934 MALVETSSNSSTVHHHLFPNTLFLPQIMMIIVMVIMVMGIVTTRIMKNSLCSCETCQAYLTSSWSKHFKNLCDWYAHLLKQSPTKTIHIHVLQNTITANPKNVEYMLKTRFHNFPKGKPFSTILGDFLGRGIFNVDGHLWSFQKKMATSELTKTSIRSYAFDIVNHEIHHRLLPLLSSNQGQILDLQDIFRRFSFDTICRFSFGLDPMCLELSMPISDFAVSFDLASRLSAERAMSVSPLVWKTKRLLNVGSEKKLREALCNINVLAKEVIRQRRKMGFCGQKDLLSRFMSTVNDDKYLRDIVISFLLAGRDTVASALTSFFWLLAKHPEVETKIRDEAKNVVGTEMEVTRFEELQKLQYLEAATYESMRLFPPIQLDSKFCVEDDVLPDGTWVKGGTRVTYHPYAMGRLEEIWGKDCLEFKPERWLKDGVLVSENPFKYPVFQGGMRVCLGKEMALLEVKSVALSLLKRFHVQFVGVGPTSHGTPRFCPGLTATFSCGLPVKLTQR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272304g00001 507 Gene3D Cytochrome P450 57 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 Pfam Cytochrome P450 83 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 SUPERFAMILY Cytochrome P450 69 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PANTHER CYTOCHROME P450 45 481 - -
Stsc272304g00001 507 CDD CYP86A 83 476 - -
Stsc272304g00001 507 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272304g00001 507 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272304g00001 Stsc-Chr272304 2026 4035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272304g00001 45 507 Cytochrome P450 AT2G27690 60.085 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272304g00001 K20624 - gmx:102662117 711.449