Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272294g00001 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGAAAGTGGGGGTGGTGGTGGGTTGAAGAAGGAAGTTGCAAAAAAGGAATCTTTCAAGGAATCATCAGCTCCTCAGGTTCATCACCCCAGCAGGGTTAGCTCAGATAAATCAAAGTCACGGAGTGGCTCAGATCCTAAGAAGGAAACACCAGTTCCGAACGATGGGCCAACTGCTCATATTGCTGCTCAAACATTTACATTTCGAGAGCTTGCAGCTGCCACAAAAAATTTTAGGCCAGAATGTTTACTTGGGGAAGGAGGTTTCGGGCGTGTTTACAAGGGTCGGCTTGAGAGCACAGGACAGATAGTTGCTGTAAAGCAACTTGATCGAAATGGCCTTCAAGGGAATCGGGAATTTTTGGTTGAGGTTCTCATGCTAAGTCTCTTACATCACCCGAATCTCGTGAACTTAATTGGTTATTGTGCTGATGGTGATCAGCGGCTCCTTGTTTATGAATTCATGCCATTGGGATCTTTGGAGAATCATTTACATGGTTAG 540 0.4519 MGGCFPCFGSSNKEESGGGGGLKKEVAKKESFKESSAPQVHHPSRVSSDKSKSRSGSDPKKETPVPNDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLENHLHG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272294g00001 179 MobiDBLite consensus disorder prediction 45 61 - -
Stsc272294g00001 179 ProSiteProfiles Protein kinase domain profile. 91 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272294g00001 179 SUPERFAMILY Protein kinase-like (PK-like) 67 178 IPR011009 -
Stsc272294g00001 179 Pfam Protein tyrosine and serine/threonine kinase 96 178 IPR001245 GO:0004672|GO:0006468
Stsc272294g00001 179 FunFam Serine/threonine-protein kinase PBS1 64 167 - -
Stsc272294g00001 179 MobiDBLite consensus disorder prediction 1 72 - -
Stsc272294g00001 179 Gene3D Phosphorylase Kinase; domain 1 64 167 - -
Stsc272294g00001 179 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Stsc272294g00001 179 PANTHER OS07G0668900 PROTEIN 4 178 - -
Stsc272294g00001 179 MobiDBLite consensus disorder prediction 18 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272294g00001 Stsc-Chr272294 4356 5781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272294g00001 4 177 Glycoside Hydrolase AT3G07070 58.427 1.15e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc272294g00001 PK_Tyr_Ser-Thr 6.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272294g00001 - - adu:107468111 317.775