Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272293g00001 ATGGATATAGGTTGTAGCTTGCCGCATTCAAAAATGGTGTTGGATCGTTTCGATTCTTGCATTGCTTTTGGTGGGAGGGGTTTTTATTGTACTTTTCGTGGGAACTCGAGAGCTATCCTGATGAAAGCGCGGTTTAGCGCCATGAAAAAGAATGGTAGTAGTAGTTCAAGATTGGCTTGTGTAGGAGAGTTCAACTTTTCAAATGTGAAGAAAATAGGGAAATTTTGTGGCAACAGTGATGATTTTCAGGTGGGTTCTGATTTGGATTCCATCTCAGGAGCTGCGTCGAATGAACCGTTAGAAGACGAAAAAACATTTGGGGGTGAAATAGAGCAAGAGGTACAGACAGTGGATGAATTGAAAGAACTATTGCATAAGGCCTTGAAGGAACTCCAAGTTGCTAGGCATAATAGTGCAATGTTTGAGGAGAGGGTCAAGAAGATATCTGAGAGTGCGATTTTCTTTCAGGATGAAGCATCAAGAGCTTGGAATGATGTTAATTCTACTCTTGATATCATCCAGGAAATTGTGGGTGAAGAATTTATTGCCAAGGAAGCTGTTCAGAAAGCGACCATGGCTCTTTCTTTTGCCGAGGCTAGGCTTCAAGTAGCCATGGAGTCTTTGGAGGTTGCAAAAGGAGCTTACAATCCTCCATCGCAAGGTGCCAAAGAGAGCAATGACGATGAAGATATATTGGAAGAGGAGCAATTGCTTGTGGTTGCTCAAGAAGATATCAAGGAGTGCCAGTCAAATTTAGCTAATTGCGAGTCAGAGCTGAGGTACTTGCAAAGTAGAAAGGAGGAGTTGCAGAATGAAGTGAACAAGTTGCATGAAATTGCAGAAAAGGCACAGACGAATGCAGTAAAAGCCGAGGAGGACGTCGCAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCCGATGAACTTAAGGCTGCACAAGCCGTAAATGATGCAGAGATTGCATTATCCAAAGCAGATACGTCTGCCTCTAGTGTTAATGCTGACTCTGGAATCACTCTACAAGAACAAGAGGTTTCTGCCGTTCCTAAGGAGGAGAATATTGTTCAAAGTGTTTCTGGTGATGACAATGTTGACTCAGACAGAGATTCCCGAATTGACGATGAAGCCTTGCTTGGCAAGCAATCGTCAGACAGACTTTCTGATAAAACCAGCCAAATTTTTGAAGACACAGTGCAGTCTGATTATTTGAGTGATCATGAAAATGGACAGTTGAGCTTAGACCCATCTAAAGAAGCTGAAGTTGAAGTAGAGAAAATAATGAATGCAGTTCAAATGAAAAAACAGGAAACGCAGAAAGATATGACGAGAGACAATCCACCACCTGTTCCCAAGGCATTGTTAAATAAGTCTTCCAGATTCTTTCCTGCATCATTCTTCTCCTTTACTGTCGATGGTGATGATAATACACCAGAATCATTTTTGCAAAGTTTCGTGGAGTCCGCACAGAAGCTGCTACCTAAGCTAGTTATTGGGATATTGTTACTTGGAGGAGGGATTTCCTTCTATGCAAGTAGATCAGAGAGGAGTTCACAATTACTTCAGAAACCAGAACTAATTACAACCACTGCTGAAGAAGTTTCCACAAGTGCAAAACCTTTGGTTAGACACCTTCAGAATCTTCCCACAAGAATCAAGAATATTATTGCATCATTATCTGATCATGAGGTGGATGAGGAGGAAGCATCCCTTTTTGATATGCTTTGGTTATTACTTGCTAGTGTTATTTTTGTGCCAATGTTTCAGAAAATCCCTGGAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTTGAGCTCTCTTTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCACAGCTCAGGTTTTAGTGACTGCTGTGGTTGTCGGCCTAGTGGCTCATTATGTTTGCGGCCAAGCAGGCCCTGCTGCTATTGTCATCGGGAATGGCCTCGCATTATCGTCAACCGCTGTTGTTTTGCAAGTATTACAGGAGAGAGGTGAGAGCACATCACGCCATGGACGAGCCACATTTTCCGTTTTACTTTTTCAGGACTTGGCGGTTGTGGTCTTGCTAATTCTCATACCTCTTATTTCACCTAATTCATCTAAAGGAGGGGTTGGTTTTCAAGCGATTGCGGAAGCTCTTGGTCTGGCTGCTGTAAAGGCAGCAGTTGCCATCACTGTCATTATTGCAGGTGGTCGATTGCTACTTCGACCAATATATAGGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACAAGCCTTCTCACAGCCAGAGCAGGGCTTTCCATGGCACTAGGATCATTTTTGGCTGGCTTACTACTAGCAGAAACTGAATTTTCCTTACAAGTGGAATCCGACATTGCTCCATATCGTGGTCTTCTGTTAGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAAATTTCAAGTCATTATGGGGACACTGGCACTCTTCTTATGTGGCAAGACACTGTTGATTACTGTGATTGCTAGAATTTTTGGTATTTCACTCATTAATGCCATAAGAGTTAGCCTCCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCCTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCTCTACTGTTTCTTCTTGTGGGAATTTCAATG 2733 0.4204 MDIGCSLPHSKMVLDRFDSCIAFGGRGFYCTFRGNSRAILMKARFSAMKKNGSSSSRLACVGEFNFSNVKKIGKFCGNSDDFQVGSDLDSISGAASNEPLEDEKTFGGEIEQEVQTVDELKELLHKALKELQVARHNSAMFEERVKKISESAIFFQDEASRAWNDVNSTLDIIQEIVGEEFIAKEAVQKATMALSFAEARLQVAMESLEVAKGAYNPPSQGAKESNDDEDILEEEQLLVVAQEDIKECQSNLANCESELRYLQSRKEELQNEVNKLHEIAEKAQTNAVKAEEDVANIMLLAEQAVADELKAAQAVNDAEIALSKADTSASSVNADSGITLQEQEVSAVPKEENIVQSVSGDDNVDSDRDSRIDDEALLGKQSSDRLSDKTSQIFEDTVQSDYLSDHENGQLSLDPSKEAEVEVEKIMNAVQMKKQETQKDMTRDNPPPVPKALLNKSSRFFPASFFSFTVDGDDNTPESFLQSFVESAQKLLPKLVIGILLLGGGISFYASRSERSSQLLQKPELITTTAEEVSTSAKPLVRHLQNLPTRIKNIIASLSDHEVDEEEASLFDMLWLLLASVIFVPMFQKIPGAIAEFGVVFLLFNIGLELSFERLSSMKKYVFGLGTAQVLVTAVVVGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITVIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGSFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSKFQVIMGTLALFLCGKTLLITVIARIFGISLINAIRVSLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLLVGISM 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272293g00001 911 FunFam K(+) efflux antiporter 2 chloroplastic 592 911 - -
Stsc272293g00001 911 Pfam Sodium/hydrogen exchanger family 576 910 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc272293g00001 911 Gene3D - 568 911 IPR038770 -
Stsc272293g00001 911 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 593 911 - -
Stsc272293g00001 911 Coils Coil 110 137 - -
Stsc272293g00001 911 Coils Coil 231 293 - -
Stsc272293g00001 911 MobiDBLite consensus disorder prediction 362 382 - -
Stsc272293g00001 911 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 593 828 IPR004771 GO:0006812|GO:0008324|GO:0016020
Stsc272293g00001 911 MobiDBLite consensus disorder prediction 344 390 - -
Stsc272293g00001 911 Coils Coil 416 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272293g00001 Stsc-Chr272293 22 5206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272293g00001 116 911 Inorganic Solute Cotransporters AT4G00630 63.082 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272293g00001 K03455 - gmx:100791174 1124.77