Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272283g00004 ATGGATTCAAAGACGCCGCAACGGCGTCGTTCAGGAAGTGAAATCCACAATGGCACCGCTACTAGAGAGAAGAAGCCCAAACGCAGCGAGGTCCTCGCAAAGAAGAAAGCCGTTGAGCAAGCCATCAAATCAGCACGTGCCGAAAAGGATCACCTCGCTTCCTTCCCTGAGTTCCGCCACTTCGTCAATAACGGTCTATCTATGTGTTTGAAGTCAGGACGCGGTAATAAACTATCTTCTCCTGTTAAGCACTATGTTCAGAGTCTCCTTGAGCTAAACATGGAAGGACCCTATGGATCTGAGTGGTTGGACGAAGAAAAGGTTAAGCGCAGAGAAATGGTTGCTCCGGAAGCACACTATATATTTGTGCATGAGGTTGCGGACTCAGTTGGTGATGAGACGAGAACGATGTTGAGTGCAGAAGAGACTTCAACTAGTTGTGTAGAAGATAGTCGCCCCTTGGTTGGATTTGTACATTACCGTTTTGTTCTAGAAGAGGATGTACCCGTCCTTTATGTGTATGAGCTGCAGATTGAACCTCGTGTTCAGGGAAAAGGATTAGGGAAGTTTCTAATGCAACTAATTGAGCTTATTGCCCAAAAGAACTGCATGGGTGCTGTCATACTAACTGTTCAAAAAGCAAACTTACTAGCTCTGAATTTCTATCTGAGTAAGCTGAGATACATCATATCAACCATTTCCCCTTCAAAGATGGGGATTGAGAAGAGTTACGAAATTCTTTGCAAAACATTTAATGACGAAGCTAAAACTATTCTTGAGGTGAATGAAAACAAAAGCTTTTGA 804 0.4366 MDSKTPQRRRSGSEIHNGTATREKKPKRSEVLAKKKAVEQAIKSARAEKDHLASFPEFRHFVNNGLSMCLKSGRGNKLSSPVKHYVQSLLELNMEGPYGSEWLDEEKVKRREMVAPEAHYIFVHEVADSVGDETRTMLSAEETSTSCVEDSRPLVGFVHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKNCMGAVILTVQKANLLALNFYLSKLRYIISTISPSKMGIEKSYEILCKTFNDEAKTILEVNENKSF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272283g00004 267 CDD NAT_SF 148 210 - -
Stsc272283g00004 267 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 259 IPR000182 GO:0016747
Stsc272283g00004 267 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 135 224 IPR016181 -
Stsc272283g00004 267 Gene3D - 60 254 - -
Stsc272283g00004 267 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 22 265 IPR039949 GO:0010485|GO:0043998
Stsc272283g00004 267 Pfam Acetyltransferase (GNAT) family 142 222 IPR000182 GO:0016747
Stsc272283g00004 267 Coils Coil 28 48 - -
Stsc272283g00004 267 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272283g00004 Stsc-Chr272283 17040 20385 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc272283g00004 Acetyltransf_1 1.9e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272283g00004 K20794 - gmx:100500318 345.125