Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272283g00003 ATGTGTTTGAAGTCAGGACGCGGTAATAAACTATCTTCTCCTGTTAAGCACTATGTTCAGAGTCTCCTTGAGCTAAACATGGAAGGACCCTATGGATCTGAGTGGTTGGACGAAGAAAAGGTTAAGCGCAGAGAAATGGTTGCTCCGGAAGCACACTATATATTTGTGCATGAGGTTGCGGACTCAGTTGGTGATGAGACGAGAACGATGTTGAGTGCAGAAGAGACTTCAACTAGTTGTGTAGAAGATAGTCGCCCCTTGGTTGGATTTGTACATTACCGTTTTGTTCTAGAAGAGGATGTACCCGTCCTTTATGTGTATGAGCTGCAGATTGAACCTCGTGTTCAGGGAAAAGGATTAGGGAAGTTTCTAATGCAACTAATTGAGCTTATTGCCCAAAAGAACTGCATGGGTGCTGTCATACTAACTGTTCAAAAAGCAAACTTACTAGCTCTGAATTTCTATCTGAGTAAGCTGAGATACATCATATCAACCATTTCCCCTTCAAAGATGGGGATTGAGAAGAGTTACGAAATTCTTTGCAAAACATTTAATGACGAAGCTAAAACTATTCTTGAGGTGAATGAAAACAAAAGCTTTTGA 603 0.408 MCLKSGRGNKLSSPVKHYVQSLLELNMEGPYGSEWLDEEKVKRREMVAPEAHYIFVHEVADSVGDETRTMLSAEETSTSCVEDSRPLVGFVHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKNCMGAVILTVQKANLLALNFYLSKLRYIISTISPSKMGIEKSYEILCKTFNDEAKTILEVNENKSF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272283g00003 200 Gene3D - 2 187 - -
Stsc272283g00003 200 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 2 198 IPR039949 GO:0010485|GO:0043998
Stsc272283g00003 200 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 39 192 IPR000182 GO:0016747
Stsc272283g00003 200 Pfam Acetyltransferase (GNAT) family 75 155 IPR000182 GO:0016747
Stsc272283g00003 200 CDD NAT_SF 81 143 - -
Stsc272283g00003 200 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 66 157 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272283g00003 Stsc-Chr272283 17040 20385 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc272283g00003 Acetyltransf_1 8.8e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272283g00003 K20794 - zju:107419482 280.026