Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272282g00001 ATGGCCAAACAAGAAAAACCAAAACCTGGGTGTTTCTCTGGATTCTTGCGTGTGATCCTATGTGCTGGAACTGGAACTAGTCCTCCAGTTCATCCATCTCAAGATGAATCTGAAAATGTGCCTTCAATTTTCAAGAAAAATGATGCATTGATCCATGAAGATTTTGCTGCTTCTACCCCTGGATTGGTGGCAAGGTTAATGGGGTTGGATTCAATTCCGAACACCAACTGTTTGATGAAATGTCACTCCCAAGATTCAGTTCTAAGGAGCAGGTCAGTGAATTTTGTGGACTACTTGCTAAATTTCGATGTGGGCCAAGAAAGTTTCCACCGCCGGGCGAAGACTTCGGCCTCGTTTCGCGAGGTTCCGGCGTCGGCATTGGTTCAGGGTCAACAAAAACAAGACCATGATCTTGTTGTGTTTCATCATTGGGATTGCAATGTGGTTAATAAGGACCATGAAGCTCGACGCGAATTGAGGACATTTGAACCGGGGTTGACGAAAGAATCGAAACAGGGGAAGAAACAGAGCAAGGAAACAGGGGAAAGGAATCAAAGGAAGAACAAGAAGATTTCAAAGTTGAAGAATGAGCCTAGAAGGGTTCCTTCTAATTCTAACAAGAATGGAAGAAAGGTTAGAAAGCAAAGTGAAGATAAAGATTGTTCTAGTGTCTCTTCATGTTCTTCCAAGAGTTATTATGGTTATAGATATAGTAGTGATGGTAATGGAGATTGTGGTTCAAGCACAAGTTCTTGCTCTCCATTGTTGCAAAGCAAGTATAAGAAAGAGTTTGTTGGTGAATCAAACCTCAAAAACAAGATGAGAAAGAAGAAAATACCAAAGAAGATAGAGAGTGATTGTGACTCAGAAAATCTCAGTCCAATTTCAGTTCTTGATGTCAATGATTGTACTTCCCTCTATGGAACAAATTCTATAGATGCTACACTACCCTTGGCTTCAAACACAAAGTGGAAACCTTCACCATTAAGATCCTCAAGCGATGGAATTGAAGGCACAAGAAGTAACAAAAATGGTGGTGCTTATGCCAACATTGACATCAACGGAGAAGTAGAATATTACTCAGAACTATTTTTGAAACTTTGCACAATGATAGAGAAGGATATAAGAGAGTTAGATTGCACAACAAAGCATGTTCATGAGGATTTTGAGGAAATTTGTTTTGTGTTTGAGCACAAAATTTTGGAT 1206 0.3988 MAKQEKPKPGCFSGFLRVILCAGTGTSPPVHPSQDESENVPSIFKKNDALIHEDFAASTPGLVARLMGLDSIPNTNCLMKCHSQDSVLRSRSVNFVDYLLNFDVGQESFHRRAKTSASFREVPASALVQGQQKQDHDLVVFHHWDCNVVNKDHEARRELRTFEPGLTKESKQGKKQSKETGERNQRKNKKISKLKNEPRRVPSNSNKNGRKVRKQSEDKDCSSVSSCSSKSYYGYRYSSDGNGDCGSSTSSCSPLLQSKYKKEFVGESNLKNKMRKKKIPKKIESDCDSENLSPISVLDVNDCTSLYGTNSIDATLPLASNTKWKPSPLRSSSDGIEGTRSNKNGGAYANIDINGEVEYYSELFLKLCTMIEKDIRELDCTTKHVHEDFEEICFVFEHKILD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272282g00001 402 MobiDBLite consensus disorder prediction 159 187 - -
Stsc272282g00001 402 MobiDBLite consensus disorder prediction 159 227 - -
Stsc272282g00001 402 Pfam DUF761-associated sequence motif 59 76 IPR032795 -
Stsc272282g00001 402 Coils Coil 177 197 - -
Stsc272282g00001 402 PANTHER OS05G0128300 PROTEIN 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272282g00001 Stsc-Chr272282 4409 6458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272282g00001 1 402 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 24.945 7.30e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272282g00001 - - lang:109342337 281.952