Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272277g00003 | ATGGAATATAAACTGAATTCTTCTTCAACAATTCCAATCCATGTTCACACAAAGATCTCAAATTCTCCACCTCCTTCTTCTTCATCTCCAAACTCACAATCTCAATCTCAATCTCCAACATCCTCTGCTGCCCCATCGCCTCCTCCTCTTCCTCCGCCTCCTGTGGTGGTCAGCCCTTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTTGAGAAGTGTGTTCTTGCTCCTTACTTTCCTCCAACTGATCCACTCAAGTTCACCATTGCACATAGAGTCTTTGGAGCAAGTAACATTATCAAGTTCTTGCAGGAACTTCCAGAAAGCCAAAGGGCAGATGCAGTGAGCAGCATGGTGTATGAAGCAAATGCAAGAATTAGGGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAGCAAGTTAGTGAGCTTCAAGCACAATTGGCAAAAGCACAAGCTGAGCTGGTTAACATGCACTGCCAACAAGCCAATTTGGTTGCACTCATTTGCATGGAAATGAGTAGTAGTAGTACTCAATTATCATCTTCACAAGAACAACAACAACACATGATGATGATTCAGCCTCAGAATAATAATAATAATAATAATCATGTTGATATGACTTGCTTCATTGATGACAACAATCTTGCTTCTGCTTGGGAGCCTCTATGGACATGA | 690 | 0.4377 | MEYKLNSSSTIPIHVHTKISNSPPPSSSSPNSQSQSQSPTSSAAPSPPPLPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQANLVALICMEMSSSSTQLSSSQEQQQHMMMIQPQNNNNNNNHVDMTCFIDDNNLASAWEPLWT | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272277g00003 | 229 | ProSiteProfiles | LOB domain profile. | 58 | 159 | IPR004883 | - | |
Stsc272277g00003 | 229 | Pfam | Lateral organ boundaries (LOB) domain | 59 | 156 | IPR004883 | - | |
Stsc272277g00003 | 229 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Stsc272277g00003 | 229 | Coils | Coil | 138 | 165 | - | - | |
Stsc272277g00003 | 229 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 58 | 201 | - | - | |
Stsc272277g00003 | 229 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272277g00003 | Stsc-Chr272277 | 10287 | 12322 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272277g00003 | 55 | 229 | AS2 family | AT1G07900 | 64.045 | 3.77e-75 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Stsc272277g00003 | LOB | 3e-41 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272277g00003 | - | - | qsa:O6P43_005075 | 263.077 |