Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272277g00002 ATGCTCAATTCCACTGCACAACATACTATACATGCAGAATGGGATGGATATGAGGTAGTATACGATCTCCTTGTTTTGGAGACCTCCTTCAATCCCATCCTCCGCCGCGACATCTTCACCAACGTCGGCGCTCCCTCCGCCGCCGTTCGTTGTTCACAAATCTTCGATGTGCACCCTCCGTCGCCGCACCCTCCTTCGTCGCACCGTCCGTCGCGCCAGACCACCGTCAACCCCTCATCTCTCACTAACTCCTTCAATCTTCAATCTGCACTCAAAAGGGAAAGAAGAAAGAACGCTTCGTCGCCTCTCCCTCCGTCAACCCTAACCTCCGCGGTGGCTCCCTCCGTCAACCCCAACCTCTGTCGCGGCTCCCTCTGTCAACCCCACCTCCATCGCGTCCTCTTCACCTCCATAGGTGCTCCTTCCGCCGCTGCTCCTTCCGCCTCCATCGAGATCCGTAACTTCCTTGGTGAGAAGAAGGTCAGGAAAGTGGACATGCTTGAGGGATTCTCTGTTGTTATATCTGAGAAGGTTAAGGATGAACTCATTTTAGATGGAAATGACATTGAGCATGTGTCTCTGTCATGCGCTGTGATTAACCAGTTCTTGCTTCCTAAGGTCTTTTTCTCATGA 633 0.5261 MLNSTAQHTIHAEWDGYEVVYDLLVLETSFNPILRRDIFTNVGAPSAAVRCSQIFDVHPPSPHPPSSHRPSRQTTVNPSSLTNSFNLQSALKRERRKNASSPLPPSTLTSAVAPSVNPNLCRGSLCQPHLHRVLFTSIGAPSAAAPSASIEIRNFLGEKKVRKVDMLEGFSVVISEKVKDELILDGNDIEHVSLSCAVINQFLLPKVFFS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272277g00002 210 Gene3D - 139 206 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Stsc272277g00002 210 MobiDBLite consensus disorder prediction 55 82 - -
Stsc272277g00002 210 SUPERFAMILY Ribosomal protein L6 146 202 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Stsc272277g00002 210 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272277g00002 Stsc-Chr272277 4012 6320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272277g00002 119 201 Cytoplasmic Ribosomal Protein Gene Family AT4G10450 59.302 3.46e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272277g00002 K02940 - gmx:100810086 92.4337