Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272274g00007 ATGGCAGCCAAAAGTAGTGACTTGAAGCTTTTGGGTAGATGGTTCACCCCATTTGTCACTAGGGCGAAGATTGCTCTTAACATCAAAGGATTGGAATATGAGAACATTGAAGAGGACTTGGACTCCAAGAGTGACCTTCTTCTTCGTTCAAATCCTGTTTACAAGAAAGTCCCAGTTCTAATTCATGGTGAGAAATCCATATGTGAATCCTCAATCATAGTTGAATATATTGATGAGGTTTGGTCCAATGCTCCTTCTATCCTTCCTCAACATGCTTATGACAGAGCAATTGCTAGATTCTGGGTTTCCTATTTTGATGAAAAGTTATTTGCTTGCATGAAAAACATTCTGGCGGGTGGTGAAGATGAGAAGCAGAAGAAGCCACACTTTGAGCAATTGGAAGAAGTGTTTGTGAGGTTGGAAGAGGCATTCAACCAATGCAGTGATGGAAAGCCCTTCTTTGGAGGCAATAACGTTGGATTCATTGACATTACCTTTGGGAGCTTCTTGCCCTTTATGCGTGTCATAGAAGAGCTAAATGGAAAGAAGGTCCTCGTGGGCGATAAATTTCCGGCGTTAGCGAATTGGGCTGCGAATTTTGCTGCGGATTCAATTGTGAGTAAAACTCTTCCTGACATTGATAAACTTGTTTTGTTTGCTAAGGCTCTTCAGCAAAAATGGGCTGCTGCTAAAGTTGCTGCCAAGTAA 708 0.4181 MAAKSSDLKLLGRWFTPFVTRAKIALNIKGLEYENIEEDLDSKSDLLLRSNPVYKKVPVLIHGEKSICESSIIVEYIDEVWSNAPSILPQHAYDRAIARFWVSYFDEKLFACMKNILAGGEDEKQKKPHFEQLEEVFVRLEEAFNQCSDGKPFFGGNNVGFIDITFGSFLPFMRVIEELNGKKVLVGDKFPALANWAANFAADSIVSKTLPDIDKLVLFAKALQQKWAAAKVAAK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272274g00007 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc272274g00007 235 FunFam Glutathione S-transferase U9 88 230 - -
Stsc272274g00007 235 CDD GST_N_Tau 8 81 - -
Stsc272274g00007 235 Gene3D Glutaredoxin 1 87 - -
Stsc272274g00007 235 FunFam Glutathione S-transferase GSTU6 3 88 - -
Stsc272274g00007 235 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc272274g00007 235 SUPERFAMILY GST C-terminal domain-like 79 226 IPR036282 -
Stsc272274g00007 235 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Stsc272274g00007 235 SFLD Main.3: Omega- and Tau-like 4 231 IPR045073 -
Stsc272274g00007 235 Gene3D - 88 232 - -
Stsc272274g00007 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 229 IPR010987 -
Stsc272274g00007 235 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 216 IPR045073 -
Stsc272274g00007 235 Pfam Glutathione S-transferase, C-terminal domain 99 202 IPR004046 -
Stsc272274g00007 235 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Stsc272274g00007 235 SFLD Main (cytGST) 4 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272274g00007 Stsc-Chr272274 10242 12021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272274g00007 5 226 Glutathione S-transferase Gene Family AT1G10370 52.232 3.92e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272274g00007 K00799 - gmx:547576 275.404