Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272267g00001 ATGGGTGATTTGATGTCAAATGTTGCATTAGCATTGGATGGAGAAGACGGAGTTCAGATAGCCGTATCTGGGTGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCATTGCTTCTTGGGGCTTGGAAAACGAAACCTACATTGTTCGTGGTGCCAGAAGACAGTAGCTTATTTTACACACTGGGATTTCTTATCGCTGGACTGCTATGGGCGCTTGTTGTTTTACCTCGCAACAATATGCATCCTAATCGGGTATTAGGAATTGGTCTCATTGGCCTTTATTTGGTGTTTCTTTCGTTTAGGGTGTGCACTTCCACGGGCCTAATAGAAGTTGCTGGTACAAGTTGA 360 0.4444 MGDLMSNVALALDGEDGVQIAVSGCYAGPMFNTLVGLGISLLLGAWKTKPTLFVVPEDSSLFYTLGFLIAGLLWALVVLPRNNMHPNRVLGIGLIGLYLVFLSFRVCTSTGLIEVAGTS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272267g00001 119 Pfam Sodium/calcium exchanger protein 2 105 IPR004837 GO:0016020|GO:0055085
Stsc272267g00001 119 Gene3D - 1 107 IPR044880 -
Stsc272267g00001 119 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272267g00001 Stsc-Chr272267 3417 3776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272267g00001 1 114 Antiporters AT5G17860 47.826 1.65e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272267g00001 K13754 - gmx:100796101 202.601