Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272255g00002 ATGGAGGAACAACAAGCGGCTAATAAACGGAGGCGCGTGTACTCGATTGAGCCAAACAAAGTGGTGTTAGAAGAAGCAGTGTTTACAAGGAATTACATGAACTATTTGGTTCCAGCATTGGTGAAGATCAAGGGAGAAAGGAGCAGCCATTGTTGTTGTGAGATTGAGAATGTTGTGAAGCATGAAGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAATGCTCTAAAATCCAAGCTTATTCAAAGGTACCAAAATGAAATAATAATAAGGAATGATAATAATAACCCTAGTTGTAGTTCAAAGTTCAATTATGTTATTAATAAGGACATAAAAGAAGAAGAAGAATATAAAGATGGGGTCATAAATAATAATAATAATAATAATAATAATAATAATAATAATAGCAAGTTGAGGTGCCTAAGAAGGTTGATTCCTGGTGGAGAAGATATGTGTAATGAACAAATGGTTGAAGAATTAGAGAGCTATGTAACCTGTTTGAAAATGCAGGTGAATGTTCTTCAATACCTTGCAGACAAGAATTATTGA 561 0.3476 MEEQQAANKRRRVYSIEPNKVVLEEAVFTRNYMNYLVPALVKIKGERSSHCCCEIENVVKHEVDMAMVLSAQGFAWSNALKSKLIQRYQNEIIIRNDNNNPSCSSKFNYVINKDIKEEEEYKDGVINNNNNNNNNNNNNSKLRCLRRLIPGGEDMCNEQMVEELESYVTCLKMQVNVLQYLADKNY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272255g00002 186 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 27 183 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272255g00002 Stsc-Chr272255 23388 23948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272255g00002 3 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 33.898 6.81e-25 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272255g00002 - - lja:Lj6g3v1358590.1 168.703