Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272253g00003 ATGTCGTGCACTAGAATACCCCTATATTTTCTGCAACGTGACAAACTTAGAGAAGTTGCAGATAATTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTTTTCTCTGATCTCTCATATTTGTATAATCACCCTGGGAAGTGCGCCAGGCCAATATCCTGGGAGATAGTACAGGACAATGCCTATGATCAAGACCCTTATGCTAAGGAGTTTGGAATCAAGATCAATGAAAAGCTTGCTCAAGTTGAATCTATGTTAGAACACAGTGGACGCAAAGGAGAAAGGGTTCGGTTCCTAGCAGAACGAGGATGCGAGGTAGCAATCATTAGCGATGAAGATTTCAGGGACTATCATCACAATGGAGGAGCTAATTAG 378 0.4233 MSCTRIPLYFLQRDKLREVADNYIRPLLTKGVPSLFSDLSYLYNHPGKCARPISWEIVQDNAYDQDPYAKEFGIKINEKLAQVESMLEHSGRKGERVRFLAERGCEVAIISDEDFRDYHHNGGAN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272253g00003 125 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 5 90 - -
Stsc272253g00003 125 Pfam N-terminal acetyltransferase A, auxiliary subunit 3 50 IPR021183 -
Stsc272253g00003 125 Gene3D - 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272253g00003 Stsc-Chr272253 42299 44410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272253g00003 49 87 Eukaryotic Initiation Factors Gene Family AT5G43810 59.091 7.28e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272253g00003 K20792 - gmx:100820094 80.8777