Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272243g00013 ATGAAGAGGGTTTTGTTGGTTCCTGTGTTTGTTGCTTTTGCTCTCATTGTTATGGTTCCTGAGGCTTCTGCTAAGAGATGGCTTGTTGGTGATAACATGGGTTGGTCCACTAGCTATGGTGTCAACTACACTAATTGGGCCAAGGGAAAGCATTTCTACCTTGGTGATTGGCTATTCTTTGTGTATGATAGAAACCAAATGAACGTTCTAGAGGTTAACAAGACAGACTATGAAAGTTGCAATTCTGATCACCCTCTTCACAATTGGACTACCGGTGCCGGAAGAGACGTCGTTCCGTTAAACGTGACTCGCAATTACTACTTCATCAGTGGCAAGGGATTCTGCTTTGGTGGCATGAAGCTAGCTGTCCATGTCGAGAAGCTGCCGCCTCCACCAAAGGCATCTCCCGAAGTATCCGGAGCGCCGTCGGCGTTTTACTCTAGAAGCCAGGTTGTTCTGCTGCCCGTTGTCTTCGCCGTTGGGGCGGCATGGGATGCATTCATTCACCTTTTGTAA 516 0.4767 MKRVLLVPVFVAFALIVMVPEASAKRWLVGDNMGWSTSYGVNYTNWAKGKHFYLGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVEKLPPPPKASPEVSGAPSAFYSRSQVVLLPVVFAVGAAWDAFIHLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272243g00013 171 Gene3D - 23 128 IPR008972 -
Stsc272243g00013 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
Stsc272243g00013 171 PANTHER BLUE COPPER PROTEIN 26 135 IPR039391 GO:0009055
Stsc272243g00013 171 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Stsc272243g00013 171 FunFam Lamin-like protein 23 128 - -
Stsc272243g00013 171 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272243g00013 Stsc-Chr272243 38339 40134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272243g00013 4 170 Phytocyanin Superfamily AT5G15350 52.976 6.90e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272243g00013 - - mtr:11412511 263.848