Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272243g00012 ATGAAAGGGATTTTGGGATCAAGCTCACCACCCATGGTGCTGCTGTTTATGGCCTTTGCCGTGCTTGTCATGTTGCCGGAGGCATCCGCGAAACGGTGGTTAGTAGGAGACAACATGGGTTGGACCTCTAATGTCAATTACAGTTCTTGGACCAAGGGAAAGCATTTCTACAATGGTGACTGGCTATTTTTTGTGTATGATAGGAAGCAGATGAATATACTAGAGGTGAACAAGAAAGACTATGAAACTTGCAACTCTGATTACCTGCTTCACAACTGGACTACCGGCGCAGGCAGAGACGATGTTCCATTGAGTGTAACACGCAATTACTACTTCATCAGTGGCAATGGGTTCTGCTCTAGAGGCATGAAGCTAGCTATAAATGTTGAGAACCTGCCACCTCCACCAAAGGGTGATAACTCAGAAATAGTTGATGCACTAGCTTTAACCCCAGCAATAGCTGAAGCACCAACACCAGCACCGCCCCCAGTAGAGATCGGAGTACTAACACTGTCCCCATAA 522 0.4655 MKGILGSSSPPMVLLFMAFAVLVMLPEASAKRWLVGDNMGWTSNVNYSSWTKGKHFYNGDWLFFVYDRKQMNILEVNKKDYETCNSDYLLHNWTTGAGRDDVPLSVTRNYYFISGNGFCSRGMKLAINVENLPPPPKGDNSEIVDALALTPAIAEAPTPAPPPVEIGVLTLSP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272243g00012 173 PANTHER BLUE COPPER PROTEIN 32 138 IPR039391 GO:0009055
Stsc272243g00012 173 FunFam Lamin-like protein 29 132 - -
Stsc272243g00012 173 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Stsc272243g00012 173 Gene3D - 29 132 IPR008972 -
Stsc272243g00012 173 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
Stsc272243g00012 173 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272243g00012 Stsc-Chr272243 36770 37630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272243g00012 15 160 Phytocyanin Superfamily AT5G15350 47.260 2.38e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272243g00012 - - aip:107624469 264.233