Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272243g00011 ATGAAGGGGATTTTGGGATCAAGCTCACCACCCATGGTGCTGCTGTTTATGGCCTTTGCTGCGCTTGTCATGTTGCCGGAGGCATCCGCAAAACTCTGGATAGCAGGAGACAACATGGGTTGGACCTCTAATGTCAGTTACAGTTCTTGGACCAAGGGAAAGCATTTCTACAATGGTGACTGGCTATGTAAGACTCAACCTCTCTCTCTATACTGTGTGAACCAGATGAATGTACTAGAGGTTAACAAGAAAGACTATGAAACTTGCAACTCTGATCACCTGCTTCACAACTGGACTTCCGGCGCAGGCAGAGACGTGGTTCCATTGAATGTAACGGGCAATCACTACTTCATCAGTGGCAATGGGTTATGCTCTAGAGGCATGAAGCTAGCTATACGTGTTGAGAACCCGCCACCTCCACCAAAGGATGATAACTGTGAAATAGGTGATGCACCAGCATTACCCCCAGCAATAGCTGAAGCACCAACACTGGCACTGCCCCCGGGAGAGATCGGAGCACCAACACCAGCACCGCCCCCAGCAGAGACCGAAGCACCAACACTGTCCCCAGAAAGGGGTGGTGCACCAACATTGACCTCAAGAAGCCAGGTTCTTCTCATGGCTGTTGTCTTTGCCGATGCATTCATTCATTTCTGGTAA 660 0.4985 MKGILGSSSPPMVLLFMAFAALVMLPEASAKLWIAGDNMGWTSNVSYSSWTKGKHFYNGDWLCKTQPLSLYCVNQMNVLEVNKKDYETCNSDHLLHNWTSGAGRDVVPLNVTGNHYFISGNGLCSRGMKLAIRVENPPPPPKDDNCEIGDAPALPPAIAEAPTLALPPGEIGAPTPAPPPAETEAPTLSPERGGAPTLTSRSQVLLMAVVFADAFIHFW 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272243g00011 219 Gene3D - 30 137 IPR008972 -
Stsc272243g00011 219 ProSiteProfiles Phytocyanin domain profile. 31 136 IPR003245 GO:0009055
Stsc272243g00011 219 MobiDBLite consensus disorder prediction 164 196 - -
Stsc272243g00011 219 Pfam Plastocyanin-like domain 41 128 IPR003245 GO:0009055
Stsc272243g00011 219 SUPERFAMILY Cupredoxins 30 134 IPR008972 -
Stsc272243g00011 219 PANTHER BLUE COPPER PROTEIN 33 167 IPR039391 GO:0009055
Stsc272243g00011 219 MobiDBLite consensus disorder prediction 169 185 - -
Stsc272243g00011 219 FunFam Lamin-like protein 29 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272243g00011 Stsc-Chr272243 34984 36040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272243g00011 15 142 Phytocyanin Superfamily AT5G15350 47.656 3.04e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272243g00011 - - aip:107624469 271.937