Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272243g00009 ATGGAGAGATTTTCGGTTGATAAGATGGCGGCGGTGGTAGTGGCGGTGGTGGCGATGGCGATGGCGATGATCGGGGTGATGGGAGAAGATCTTCATAGGGTTGGAGGTTCAAAAGGATGGCGTCCTGATGTCAACTACACTGATTGGTTTGCTCATGAGAAGACTATTTATGTTGATGATTGGCTCATATTCAATTTTGACAAGCGATACTACAACGTTCTGGAAGTGAACAAGACAAGCTACGAGCGATGCATAGACAGGGATTTCCTTAAGAACGTGACACGTGGTGGCCGCGATGTGGTTCAGTTGACGGAGCCAAGGGCCTACTACTACCTCTCCAGCGGAGGATACTGCTTCCATCAAATGAGAGTTGCCATCAACGTTGTTGCCAAACATGAGGGAAAAGACCAATCTGCCCCCATTATTGCACCTGCATCTTCATCAGCACCTTCTCAAAACTCAGCCTCTTCCATTATTATTGTGCCCTCAATTGTTATCGCATGCATTTGGATTGTGATTGTTAATGCTTTTTATATTATGTGA 543 0.4604 MERFSVDKMAAVVVAVVAMAMAMIGVMGEDLHRVGGSKGWRPDVNYTDWFAHEKTIYVDDWLIFNFDKRYYNVLEVNKTSYERCIDRDFLKNVTRGGRDVVQLTEPRAYYYLSSGGYCFHQMRVAINVVAKHEGKDQSAPIIAPASSSAPSQNSASSIIIVPSIVIACIWIVIVNAFYIM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272243g00009 180 PANTHER BLUE COPPER PROTEIN 22 144 IPR039391 GO:0009055
Stsc272243g00009 180 FunFam Lamin-like protein 28 131 - -
Stsc272243g00009 180 Pfam Plastocyanin-like domain 42 115 IPR003245 GO:0009055
Stsc272243g00009 180 Gene3D - 30 141 IPR008972 -
Stsc272243g00009 180 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Stsc272243g00009 180 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272243g00009 Stsc-Chr272243 28971 31662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272243g00009 6 179 Phytocyanin Superfamily AT2G27035 36.571 1.61e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272243g00009 - - ahf:112718354 249.98