Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272241g00003 ATGAACACTTTCTTCCGCGGTGACCACCTTCCCTACGGCCGGGACCTCCCACAACACATGGCAACCGGCCGATTCTCAAACGGTATGCTATCAACCGATTACATTGTCCAATTCCTAGGCCTAAAGGACTTATTGCCACCATATTATCTAAACCCTAATGTGAGTGATCATGATTTGCTAACCGGTGTTACCTTTGCTTCTGGCGGTTCTGGATTAGATAACCTAACAATTGAATTAACAAGTGCTATGGATTTGATGTCACAATTTAAGTTGTTTGAGGATGTTCTTCAGAGGTTGAAAAAATCGGTTGGAGAAGTTAAGACTAGGAATGTGATAAAGAATGCTGTGTTTATAGTTAGTGTTGGGACTAATGATTTGTTGTGCAATGCATATTTGTGGCCAACAAGGTTGATTAAGTATGGTAATGATGTCTCTAAGTACCATGGTTTTCTGCTGGAAAATCTAGAGTATTTTATTCAGAAACTGTACGGAATAGGAGCTAGGAGGATTATAGTGACAGGTCTTCCTCCTATGGGATGCTTGCCACTAATGGTGACAATAAACAGCATGTTACCAGGCCCAAATTGGTTAAAACGTCTGTGTAATCCCAAACAGAATCAAGAATGTCAAGCCTATAACACCAAGCTTCACTCCAAAGCTCACTCACTTGAATCCACACTCAAGGGTTCTAAGATTGCCTTCTTTGACATTTACTCACCCCTTTTGGATATGGTCCAAAGTCCACTCAAATATGGTTTTGAAGAAACAATGAAAGGGTGCTGTGGGACAGGGCTATTGGAGATGGGTCCAGTGTGCAATATGCTTGACTTGACTTGTGCTAATGCATCGAAGTTTCTATTTTGGGATGCTATGCACCCAACACAATCAGGATACTGGTTTCTTGCCCAAAATGGCCTAAAGAATGTGCTTCCATACGTTATTGGTTAG 948 0.4146 MNTFFRGDHLPYGRDLPQHMATGRFSNGMLSTDYIVQFLGLKDLLPPYYLNPNVSDHDLLTGVTFASGGSGLDNLTIELTSAMDLMSQFKLFEDVLQRLKKSVGEVKTRNVIKNAVFIVSVGTNDLLCNAYLWPTRLIKYGNDVSKYHGFLLENLEYFIQKLYGIGARRIIVTGLPPMGCLPLMVTINSMLPGPNWLKRLCNPKQNQECQAYNTKLHSKAHSLESTLKGSKIAFFDIYSPLLDMVQSPLKYGFEETMKGCCGTGLLEMGPVCNMLDLTCANASKFLFWDAMHPTQSGYWFLAQNGLKNVLPYVIG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272241g00003 315 Gene3D SGNH hydrolase 2 309 IPR036514 -
Stsc272241g00003 315 SUPERFAMILY SGNH hydrolase 93 310 - -
Stsc272241g00003 315 PANTHER GDSL ESTERASE/LIPASE EXL3 2 303 - -
Stsc272241g00003 315 Pfam GDSL-like Lipase/Acylhydrolase 21 303 IPR001087 GO:0016788
Stsc272241g00003 315 CDD SGNH_plant_lipase_like 2 304 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272241g00003 Stsc-Chr272241 6290 7655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272241g00003 3 309 Pollen Coat Proteome AT1G75910 32.581 1.09e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272241g00003 - - adu:107469400 529.635