Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272226g00001 ATGGAGCCTCCGAATCAGCAAGACCCGAACGCTGAGCCGCAAGTTCCTAGACAATGCTTCCGGCGCCGGTACCCTGAAGCAGACTATTACGAAGAGAAAAACAAGGATAAATTGCGTAATGATACCTATAAGAAGGCGATCGACTGTCATGCTGATAAAATTAAAGACAAGGTTGTACTTGATCTTGGATGTGGCACAGGGATTCTTTCTATATTATGCGCCAAGGCTGGTGCAAGCAAGGTGTATGCAGTTGATGTCGGCACTGACATTGCCGGCCAGGTGGAACATATTGTTGAAGCAAATAATAAGTCCCATGTTATCGTTGTATGGAGAGGGTCATTTGAGGATTTTGATATAGCAGAGCGGGAGGGGGTGGATGTTATAGTTTCAGAGTGGATGGGCCAGATGCTTCTAGGCGAGGAAATGCTTTTAAAAGTTATCACTGCCAGAGATCGCTGGCTCAAACCTGAAGGTCTAATTCTTCCTTCAAGCGGAACGTTGTTTATGGCTCCGTTCACCAATTCTAATCAATACCGTGAAAAAGTTGCGTTTTGGCAAAATGTTGCTGGAATTGATATGTCAGCCATGATACCCTTCACGGAACAAAATGCATTTCATTTACCGAACGTGGATAGAATCAGGAATGGATACCTTTTGGCAAATCCTGCAGAGGTGAAACACATCAACTGCTATTCTATTACCACTCCTGAGCTAATTTCTATGTCAATATCTTTTCCCATGACAGCACTGAGGCGAGGTGTGGTACATGGATTTGCATTTTGGTTTGATGCTGAGTTCACTGGGTTACGAGACGAAGAAGAACAAAGATCAGCACTAGATCTGATGGATGAAGTACCAGTTCTTTGCACTGGGCCTAGTCTTCCTTCAACACACTGGGAACAGACCTTGATTTACTTTCCTGCTCCAGTAACGCTGGAGAAAGGTAAATCTCTTACAGGCTCAGTGACATTGACGCAACCGGCCCAGCATAAATGGCACATGGATATTCAGCTAGTGTATCGTTCAAATCGCGGTAATCTAGTCTCCGATAAACGAGTTGAGCTTTTCTCGCGATAA 1077 0.4448 MEPPNQQDPNAEPQVPRQCFRRRYPEADYYEEKNKDKLRNDTYKKAIDCHADKIKDKVVLDLGCGTGILSILCAKAGASKVYAVDVGTDIAGQVEHIVEANNKSHVIVVWRGSFEDFDIAEREGVDVIVSEWMGQMLLGEEMLLKVITARDRWLKPEGLILPSSGTLFMAPFTNSNQYREKVAFWQNVAGIDMSAMIPFTEQNAFHLPNVDRIRNGYLLANPAEVKHINCYSITTPELISMSISFPMTALRRGVVHGFAFWFDAEFTGLRDEEEQRSALDLMDEVPVLCTGPSLPSTHWEQTLIYFPAPVTLEKGKSLTGSVTLTQPAQHKWHMDIQLVYRSNRGNLVSDKRVELFSR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272226g00001 358 CDD AdoMet_MTases 59 161 - -
Stsc272226g00001 358 Gene3D - 164 356 - -
Stsc272226g00001 358 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 30 344 IPR025799 GO:0016274|GO:0018216
Stsc272226g00001 358 Gene3D Vaccinia Virus protein VP39 17 162 IPR029063 -
Stsc272226g00001 358 Pfam Methyltransferase domain 59 158 IPR041698 -
Stsc272226g00001 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 342 IPR029063 -
Stsc272226g00001 358 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 17 335 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272226g00001 Stsc-Chr272226 6666 14202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272226g00001 24 321 C2H2 Transcription Factor Family AT3G12270 33.226 1.44e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272226g00001 K11437 - gmx:100795672 295.819