Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272218g00009 ATGGCTGATCAGCCGCAAGGTGGTGAAGGCAGCAGGCGTAGAAACACTAGTGCTGCGAAGCGTGGTGCTGCCGCCGCGCCAACTCAAGAAGCGGCGGCACCATCGCAGTCTACACCATGTGGTGCATGCAAATTCTTGAGGAGGAAATGTATTATCGGGTGCATCTTTGCACCCTACTTTGGCTCGGATCAAGGCGCGGCCAAGTTCGCCGCGGTTCACAAGGTGTTTGGTGCTAGCAATGTGTCCAAGCTCTTGTTGCACATCCCTGCTAACCGCCGCAACGAAGCAGTGGCGACAATCTGTTACGAGGCTCAAGCAAGGCTGTCTGATCCTGTTTATGGCTGTGTGTCCACCATTCTCTCTTTGCAACAACAGGTGGCATCTTTGCAGGCAGAGGTGGCCATAACTCAAACTCAAGTGATGAATGGTAGGATTGCATATGCAAATGCTCTTGACACCACCCACCACCAGCAGCAACAGGCACTTCAGCAGCACCACCACCAAAACATGGTGAATAATATCAATATGGGGCTGTATCCAGCATTCTCAAACAGCTCATCTGCCTCCACTAACCTTATGAACATGAGCAGCAACTTCAACCCTGCCACCGGTGGTTTCGACCTCCCAATGGAGGCGGCAGCAGCACCCACATCATCTCACAGCATTCATCCACTTCATCATAATAATTTCTCTCGCTATGATGATGATGATGAACAAGAAAGCAAGATTCCCCCAGTCTTCAACCCTGATCTGTAG 756 0.5119 MADQPQGGEGSRRRNTSAAKRGAAAAPTQEAAAPSQSTPCGACKFLRRKCIIGCIFAPYFGSDQGAAKFAAVHKVFGASNVSKLLLHIPANRRNEAVATICYEAQARLSDPVYGCVSTILSLQQQVASLQAEVAITQTQVMNGRIAYANALDTTHHQQQQALQQHHHQNMVNNINMGLYPAFSNSSSASTNLMNMSSNFNPATGGFDLPMEAAAAPTSSHSIHPLHHNNFSRYDDDDEQESKIPPVFNPDL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272218g00009 251 Coils Coil 119 139 - -
Stsc272218g00009 251 MobiDBLite consensus disorder prediction 1 38 - -
Stsc272218g00009 251 ProSiteProfiles LOB domain profile. 38 140 IPR004883 -
Stsc272218g00009 251 PANTHER LOB DOMAIN CONTAINING PROTEIN 36 201 - -
Stsc272218g00009 251 Pfam Lateral organ boundaries (LOB) domain 39 137 IPR004883 -
Stsc272218g00009 251 MobiDBLite consensus disorder prediction 227 243 - -
Stsc272218g00009 251 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272218g00009 Stsc-Chr272218 37847 40663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272218g00009 1 241 AS2 family AT3G03760 51.145 6.31e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc272218g00009 LOB 2.3e-37 No_clan